| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCTGGAGG (2) TTTTTTTTTT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | AAAGAGGCCT (2) AAGCTGGAGG (2) GGAGCAGAAA TTTTTTTTTT (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | AAGCTGGAGG (2) GGAGCAGAAA TTTTTTTTTT (2)
| 24 | 0.024 |
| P8 GC+SHH+1d culture | AAAGAGGCCT (2) AAGCTGGAGG (2) TTTTTTTTTT (2)
| 14.1 | 0.0141 |
| 3T3 fibroblasts | AAGCTGGAGG (2)
| 21 | 0.021 |
| E15 cortex | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | AAGCTGGAGG (2) TTTTTTTTTT (2)
| 9 | 0.009 |
| Hypothalamus | AAGCTGGAGG (2) TTTTTTTTTT (2)
| 10.8 | 0.0108 |
| E12.5 retina | AAGCTGGAGG (2) TTTTTTTTTT (2)
| 28.2 | 0.0282 |
| E14.5 retina | AAAGAGGCCT (2) AAGCTGGAGG (2) TTTTTTTTTT (2)
| 38.3 | 0.0383 |
| E16.5 retina | AAGCTGGAGG (2) GGAGCAGAAA TTTTTTTTTT (2)
| 14.4 | 0.0144 |
| E18.5 retina | TTTTTTTTTT (2)
| 10.9 | 0.0109 |
| P0.5 retina | AAGCTGGAGG (2) TTTTTTTTTT (2)
| 13.7 | 0.0137 |
| P2.5 retina | AAAGAGGCCT (2) AAGCTGGAGG (2) TTTTTTTTTT (2)
| 14.1 | 0.0141 |
| P4.5 retina | TTTTTTTTTT (2)
| 9.9 | 0.0099 |
| P6.5 retina | AAGCTGGAGG (2) GGAGCAGAAA TTTTTTTTTT (2)
| 11.7 | 0.0117 |
| P10.5 crx- retina | AAAGAGGCCT (2) AAGCTGGAGG (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AAAGAGGCCT (2) AAGCTGGAGG (2) TTTTTTTTTT (2)
| 11.5 | 0.0115 |
| Adult retinal | AAAGAGGCCT (2) AAGCTGGAGG (2) TTTTTTTTTT (2)
| 18.6 | 0.0186 |
| ONL | AAAGAGGCCT (2) AAGCTGGAGG (2) TTTTTTTTTT (2)
| 11.4 | 0.0114 |