Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280784	Ppp1cc	protein phosphatase 1, catalytic subunit, gamma isoform	5		19047
Gene Ontology	glycogen metabolism | hydrolase activity | manganese ion binding | mitochondrial outer membrane | mitochondrion | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein binding | protein phosphatase type 1 activity | protein phosphatase type 1 activity | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase complex
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAGGTTAT (3) TACAAACTAG TGCTGAGAAT TGTTCCTTCC (2) TTTTGTCTTT (2) 45.7 0.0457 Cb medulloblastoma GGCAGGTTAT (3) TGCTGAGAAT 74 0.074 P8 GC+1d culture ACTTATACTA CTGCTGCTGC (2) GGCAGGTTAT (3) TACAAACTAG TGCTGAGAAT 47.8 0.0478 P8 GC+SHH+1d culture ACTTATACTA ATGAGTGTGG (2) GCATTGTACA GGGGGGGTGG TACAAACTAG TGCTGAGAAT TGTTCCTTCC (2) TTTTGTCTTT (2) 57.3 0.0573 3T3 fibroblasts GGGGGGGTGG TGCTGAGAAT 17.5 0.0175 E15 cortex TACAAACTAG TGCTGAGAAT 44.5 0.0445 P1 cortex TACAAACTAG TGCTGAGAAT 18.1 0.0181 Hypothalamus CTGCTGCTGC (2) GCATTGTACA TACAAACTAG TGCTGAGAAT TGTTCCTTCC (2) 25.3 0.0253 E12.5 retina ACTTATACTA GCATTGTACA GGCAGGTTAT (3) GGGGGGGTGG TACAAACTAG TGCTGAGAAT 71.5 0.0715 E14.5 retina ATTTTGGAAT (4) GCATTGTACA GGCAGGTTAT (3) TACAAACTAG TGCTGAGAAT 76.4 0.0764 E16.5 retina ATTTTGGAAT (4) GCATTGTACA GGCAGGTTAT (3) TAATTGTCAT (2) TACAAACTAG TGCTGAGAAT TGTTCCTTCC (2) TTTTGTCTTT (2) 72.3 0.0723 E18.5 retina TAATTGTCAT (2) TACAAACTAG TGCTGAGAAT TTTTGTCTTT (2) 92.7 0.0927 P0.5 retina ACTTATACTA CTGCTGCTGC (2) GGCAGGTTAT (3) TACAAACTAG TGCTGAGAAT 86.3 0.0863 P2.5 retina ACTTATACTA ATGAGTGTGG (2) GCATTGTACA GGCAGGTTAT (3) TACAAACTAG TGCTGAGAAT TGTTCCTTCC (2) 118 0.118 P4.5 retina ACTTATACTA GCATTGTACA TACAAACTAG TGCTGAGAAT 124.8 0.1248 P6.5 retina CTGCTGCTGC (2) GCATTGTACA GGCAGGTTAT (3) TAATTGTCAT (2) TACAAACTAG TGCTGAGAAT 109.9 0.1099 P10.5 crx- retina ACTTATACTA ATTTTGGAAT (4) GGCAGGTTAT (3) TACAAACTAG TGCTGAGAAT TTTTGTCTTT (2) 68.8 0.0688 P10.5 crx+ retina ATTTTGGAAT (4) CTGCTGCTGC (2) GGCAGGTTAT (3) TAATTGTCAT (2) TGCTGAGAAT TTTTGTCTTT (2) 117.1 0.1171 Adult retinal CTGCTGCTGC (2) GCATTGTACA TACAAACTAG TGCTGAGAAT TTTTGTCTTT (2) 53.7 0.0537 ONL TACAAACTAG TGCTGAGAAT TGTTCCTTCC (2) TTTTGTCTTT (2) 51.7 0.0517