| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGATGTTTC GGAAACCTGA (3) TCATCAGAAG TTGAAGACTT (3)
| 9.8 | 0.0098 |
| P8 GC+1d culture | GGAAACCTGA (3) TTGAAGACTT (3)
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | GGAAACCTGA (3) TCATCAGAAG
| 2.4 | 0.0024 |
| 3T3 fibroblasts | AAGATGTTTC GGAAACCTGA (3)
| 7 | 0.007 |
| E15 cortex | GGAAACCTGA (3)
| 9.9 | 0.0099 |
| Hypothalamus | TTTCAGAACA (4)
| 5.4 | 0.0054 |
| E14.5 retina | TTGAAGACTT (3) TTTCAGAACA (4)
| 3.6 | 0.0036 |
| E16.5 retina | TCTTTGCAGT (3) TTGAAGACTT (3) TTTCAGAACA (4)
| 9 | 0.009 |
| E18.5 retina | GGAAACCTGA (3)
| 1.8 | 0.0018 |
| P0.5 retina | GGAAACCTGA (3) TTGAAGACTT (3)
| 4 | 0.004 |
| P2.5 retina | TTGAAGACTT (3)
| 3.5 | 0.0035 |
| P4.5 retina | TTGAAGACTT (3)
| 4 | 0.004 |
| P6.5 retina | GGAAACCTGA (3) TCATCAGAAG
| 5 | 0.005 |
| P10.5 crx- retina | GGAAACCTGA (3) TCTTTGCAGT (3) TTGAAGACTT (3)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAGATGTTTC TCATCAGAAG TTTCAGAACA (4)
| 5.7 | 0.0057 |
| Adult retinal | TCTTTGCAGT (3)
| 1.9 | 0.0019 |
| ONL | AAGATGTTTC TCATCAGAAG TTGAAGACTT (3)
| 7.6 | 0.0076 |