| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCAGGCAAA (3)
| 1.6 | 0.0016 |
| Cb medulloblastoma | CCCAGAAAAA (3) CCCAGGCAAA (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | AGGCTGGCCC (3) CCCAGGCAAA (3)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | CCCAAAAAAA (2) CCCAGGCAAA (3)
| 14 | 0.014 |
| 3T3 fibroblasts | AGGCTGGCCC (3) CCCAGGCAAA (3) GAAAATTCTT (3)
| 10.5 | 0.0105 |
| E15 cortex | CCCAAAAAAA (2)
| 4.9 | 0.0049 |
| P1 cortex | CCCAGGCAAA (3)
| 4.5 | 0.0045 |
| Hypothalamus | CCCAGAAAAA (3) CCCAGGAAAA CCCAGGCAAA (3) GAAAATTCTT (3)
| 7.2 | 0.0072 |
| E12.5 retina | AGGCTGGCCC (3) CCCAGGCAAA (3)
| 5.7 | 0.0057 |
| E14.5 retina | AGGCTGGCCC (3) CAGGTCAAGC CCCAGGCAAA (3)
| 9.1 | 0.0091 |
| E16.5 retina | CCCAAAAAAA (2) CCCAGAAAAA (3) CCCAGGAAAA CCCAGGCAAA (3) GAAAATTCTT (3)
| 10.8 | 0.0108 |
| E18.5 retina | CAGGTCAAGC CCCAAAAAAA (2) CCCAGGAAAA CCCAGGCAAA (3)
| 16.4 | 0.0164 |
| P0.5 retina | CAGGTCAAGC CCCAAAAAAA (2)
| 4 | 0.004 |
| P2.5 retina | AGGCTGGCCC (3) CAGGTCAAGC CCCAAAAAAA (2) CCCAGGAAAA CCCAGGCAAA (3)
| 14.2 | 0.0142 |
| P4.5 retina | CCCAAAAAAA (2) CCCAGAAAAA (3) CCCAGGCAAA (3)
| 11.9 | 0.0119 |
| P6.5 retina | CCCAAAAAAA (2) CCCAGGAAAA CCCAGGCAAA (3)
| 19.9 | 0.0199 |
| P10.5 crx- retina | CCCAGGCAAA (3)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | CCCAGGAAAA CCCAGGCAAA (3) GAAAATTCTT (3)
| 11.5 | 0.0115 |
| Adult retinal | AGGCTGGCCC (3) CCCAAAAAAA (2) CCCAGAAAAA (3) CCCAGGCAAA (3)
| 14.9 | 0.0149 |
| ONL | CCCAAAAAAA (2) CCCAGGCAAA (3)
| 3.8 | 0.0038 |