| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACTGTGTGA TATTTGAACA (2)
| 13.1 | 0.0131 |
| Cb medulloblastoma | AACTGTGTGA TATTTGAACA (2)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AACTGTGTGA TATTTGAACA (2) TATTTGGAAC (3)
| 27.4 | 0.0274 |
| P8 GC+SHH+1d culture | AACTGTGTGA TATTTGAACA (2) TATTTGGAAC (3)
| 21.1 | 0.0211 |
| E15 cortex | AACTGTGTGA
| 19.8 | 0.0198 |
| P1 cortex | AACTGTGTGA TATTTGGAAC (3)
| 13.6 | 0.0136 |
| Hypothalamus | AACTGTGTGA TATTTGAACA (2) TATTTGGAAC (3)
| 9 | 0.009 |
| E12.5 retina | AACTGTGTGA TATTTGAACA (2)
| 7.5 | 0.0075 |
| E14.5 retina | AACTGTGTGA TATTTGAACA (2)
| 9.1 | 0.0091 |
| E16.5 retina | AACTGTGTGA TATTTGAACA (2) TATTTGGAAC (3)
| 14.4 | 0.0144 |
| E18.5 retina | AACTGTGTGA TATTTGAACA (2)
| 11 | 0.011 |
| P0.5 retina | AACTGTGTGA
| 2 | 0.002 |
| P2.5 retina | TATTTGAACA (2)
| 7 | 0.007 |
| P4.5 retina | AACTGTGTGA TATTTGAACA (2) TATTTGGAAC (3)
| 11.9 | 0.0119 |
| P6.5 retina | AACTGTGTGA TATTTGAACA (2) TATTTGGAAC (3) TTTTTGTTTT (4)
| 10.1 | 0.0101 |
| P10.5 crx- retina | AACTAGAAAG AACTGTGTGA TATTTGAACA (2)
| 28 | 0.028 |
| P10.5 crx+ retina | AACTGTGTGA TATTTGAACA (2)
| 5.7 | 0.0057 |
| Adult retinal | AACTGTGTGA TATTTGAACA (2)
| 7.5 | 0.0075 |
| ONL | TATTTGAACA (2) TTTTTGTTTT (4)
| 9.6 | 0.0096 |