Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.281379	Casp6	caspase 6	3		12368
Gene Ontology	apoptosis | caspase activity | cysteine-type peptidase activity | hydrolase activity | induction of apoptosis | induction of apoptosis | proteolysis and peptidolysis | regulation of apoptosis
Human Homolog	CASP6[caspase 6, apoptosis-related cysteine protease]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTCATTTA (2) 1.6 0.0016 Cb medulloblastoma GAAACCAGGA (2) GTGGATCACA 6.9 0.0069 P8 GC+1d culture GAAACCAGGA (2) GTGGATCACA TAACTGCTTC TTGGACGTGG 10.3 0.0103 P8 GC+SHH+1d culture GGGAAGGGAA (4) GTGGATCACA TATTCATTTA (2) 7 0.007 3T3 fibroblasts GAAACCAGGA (2) TTGGACGTGG 7 0.007 E15 cortex GAAACCAGGA (2) GTGGATCACA 9.8 0.0098 P1 cortex GAAACCAGGA (2) GAACTGTTCC TATTCATTTA (2) 13.5 0.0135 Hypothalamus GAAACCAGGA (2) GTGGATCACA TAACTGCTTC 7.2 0.0072 E12.5 retina GAAACCAGGA (2) GAACTGTTCC GGGAAGGGAA (4) GGGAAGGGCA GTGGATCACA TAACTGCTTC TTGGACGTGG 17.1 0.0171 E14.5 retina GAAACCAGGA (2) GTGGATCACA 5.4 0.0054 E16.5 retina GAAACCAGGA (2) GAACTGTTCC GTGGATCACA TATTCATTTA (2) TTGGACGTGG 19.8 0.0198 E18.5 retina GAAACCAGGA (2) GGGAAGGGCA 5.4 0.0054 P0.5 retina GTGGATCACA TTGGACGTGG 4 0.004 P2.5 retina GAAACCAGGA (2) GGGAAGGGAA (4) TATTCATTTA (2) TTGGACGTGG 12.4 0.0124 P4.5 retina ACCAAGTCAA (5) GAAACCAGGA (2) GTGGATCACA TATTCATTTA (2) TTGGACGTGG 19.8 0.0198 P6.5 retina GAAACCAGGA (2) GAACTGTTCC GGGAAGGGAA (4) GTGGATCACA TTGGACGTGG 24.9 0.0249 P10.5 crx- retina GAAACCAGGA (2) GAACTGTTCC TATTCATTTA (2) TTGGACGTGG 7.6 0.0076 P10.5 crx+ retina ACCAAGTCAA (5) GAAACCAGGA (2) GTGGATCACA 9.6 0.0096 Adult retinal GAAACCAGGA (2) GAACTGTTCC GGGAAGGGCA GTGGATCACA 18.6 0.0186 ONL GAAACCAGGA (2) GGGAAGGGAA (4) GTGGATCACA 22.9 0.0229