| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTGTGCTCA (3) GAGCCTGGAG (3) TTTCAAAATG TTTTTTTTTT (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | CCTGTGCTCC (3) TTTTTTTTTT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCTGTGCTCA (3) CCTGTGCTCC (3) TTTCAAAATG TTTTTTTTTT (2)
| 17 | 0.017 |
| P8 GC+SHH+1d culture | CCTGTGCTCA (3) GAGCCTGGAG (3) TTTCAAAATG TTTTTTTTTT (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | CCTGTGCTCA (3)
| 10.5 | 0.0105 |
| E15 cortex | CCTGTGCTCC (3) TTTTTTTTTT (2)
| 9.8 | 0.0098 |
| P1 cortex | TTTTTTTTTT (2)
| 4.5 | 0.0045 |
| Hypothalamus | TTTCAAAATG TTTTTTTTTT (2)
| 9 | 0.009 |
| E12.5 retina | TTTTTTTTTT (2)
| 7.5 | 0.0075 |
| E14.5 retina | TTTTTTTTTT (2)
| 23.7 | 0.0237 |
| E16.5 retina | CCTGTGCTCA (3) CCTGTGCTCC (3) TTTCAAAATG TTTTTTTTTT (2)
| 10.8 | 0.0108 |
| E18.5 retina | TTTTTTTTTT (2)
| 10.9 | 0.0109 |
| P0.5 retina | CCTGTGCTCA (3) TTTTTTTTTT (2)
| 11.8 | 0.0118 |
| P2.5 retina | TTTCAAAATG TTTTTTTTTT (2)
| 8.8 | 0.0088 |
| P4.5 retina | CCTGTGCTCA (3) TTTCAAAATG TTTTTTTTTT (2)
| 15.9 | 0.0159 |
| P6.5 retina | TTTCAAAATG TTTTTTTTTT (2)
| 11.6 | 0.0116 |
| P10.5 crx+ retina | TTTCAAAATG TTTTTTTTTT (2)
| 5.7 | 0.0057 |
| Adult retinal | TTTTTTTTTT (2)
| 7.4 | 0.0074 |
| ONL | TTTTTTTTTT (2)
| 3.8 | 0.0038 |