Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28173	Mars	methionine-tRNA synthetase	10		216443
Gene Ontology	cytoplasm | methionine-tRNA ligase activity | methionyl-tRNA aminoacylation | nucleolus | rRNA transcription
Human Homolog	MARS[methionine-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGTTGCTTCC GACAGTAATA TCCAGTAAAG (2) TGGTTGCTGG 81.6 0.0816 Cb medulloblastoma GACAGTAATA TCCAGTAAAG (2) TGGTTGCTGG 127.1 0.1271 P8 GC+1d culture CCAGCTCTGT (2) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGCTGGGAA TGGTTGCTGG 70.7 0.0707 P8 GC+SHH+1d culture GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGCTGGGAA TGGTTGCTGG 117.1 0.1171 3T3 fibroblasts CGTTGCTTCC TCCAGTAAAG (2) TGGTTGCTGG 234.8 0.2348 E15 cortex CCAGCTCTGT (2) TGGTTGCTGG 282 0.282 P1 cortex GACAGTAATA TCCAGTAAAG (2) TGGTTGCTGG 104.5 0.1045 Hypothalamus GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGCTGGGAA TGGTTGCTGG 365.8 0.3658 E12.5 retina CCAGCTCTGT (2) GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGTTGCTGG 187.7 0.1877 E14.5 retina GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGTTGCTGG 947.4 0.9474 E16.5 retina CGTTGCTTCC GAACCGATCA (4) GACAGTAATA GCCAGTAATA TCCAGTAAAG (2) TGGTTGCTGG 784.1 0.7841 E18.5 retina GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGTTGCTGG 280.1 0.2801 P0.5 retina TCCAGTAAAG (2) TGGCTGGGAA TGGTTGCTGG 194.4 0.1944 P2.5 retina GACAGTAATA TCCAGTAAAG (2) TGGTTGCTGG 190 0.19 P4.5 retina CCAGCTCTGT (2) GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGTTGCTGG 192.2 0.1922 P6.5 retina GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TCTCTTGGGG TGGTTGCTGG 201.6 0.2016 P10.5 crx- retina GAACCGATCA (4) GACAGTAATA GCCAGTAATA TCCAGTAAAG (2) TGGTTGCTGG 302.8 0.3028 P10.5 crx+ retina CGTTGCTTCC GAACCGATCA (4) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGTTGCTGG 124.9 0.1249 Adult retinal AAGACACCAA (3) GACAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TGGTTGCTGG 259.3 0.2593 ONL AAGACACCAA (3) GAACCGATCA (4) GACAGTAATA GCCAGTAATA TCAGTAAAGT (3) TCCAGTAAAG (2) TCTCTTGGGG TGGTTGCTGG 425.1 0.4251