| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT AGCCTGCAGT CTCCCTTCTG (2)
| 216.9 | 0.2169 |
| Cb medulloblastoma | AAAAAAAAAA (2) ACAAAAAAAA (2)
| 832.5 | 0.8325 |
| P8 GC+1d culture | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT CTCCCTTCTG (2)
| 227.1 | 0.2271 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT AGCCTGCAGT CTCCCTTCTG (2)
| 303.3 | 0.3033 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) ACAAAAAAAA (2) ATGCAAACCT CTCCCTTCTG (2)
| 242.4 | 0.2424 |
| P1 cortex | AAAAAAAAAA (2) ACAAAAAAAA (2)
| 249.9 | 0.2499 |
| Hypothalamus | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT CTCCCTTCTG (2)
| 139.5 | 0.1395 |
| E12.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT CTCCCTTCTG (2) TTTTTATGTT
| 146.5 | 0.1465 |
| E14.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) CTCCCTTCTG (2)
| 102 | 0.102 |
| E16.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) CTCCCTTCTG (2)
| 54.4 | 0.0544 |
| E18.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT CTCCCTTCTG (2)
| 394.7 | 0.3947 |
| P0.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) AGCCTGCAGT CTCCCTTCTG (2)
| 135.5 | 0.1355 |
| P2.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) CTCCCTTCTG (2) TTTTTATGTT
| 339.7 | 0.3397 |
| P4.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) AGCCTGCAGT CTCCCTTCTG (2) TTTTTATGTT
| 301.1 | 0.3011 |
| P6.5 retina | AAAAAAAAAA (2) ACAAAAAAAA (2) CTCCCTTCTG (2)
| 273.5 | 0.2735 |
| P10.5 crx- retina | AAAAAAAAAA (2) ACAAAAAAAA (2) CTCCCTTCTG (2) TTTTTATGTT
| 52.1 | 0.0521 |
| P10.5 crx+ retina | AAAAAAAAAA (2) ACAAAAAAAA (2) ACAGCATTGT AGCCTGCAGT
| 111.4 | 0.1114 |
| Adult retinal | AAAAAAAAAA (2) CTCCCTTCTG (2)
| 61.1 | 0.0611 |
| ONL | AAAAAAAAAA (2) ACAAAAAAAA (2) TTTTTATGTT
| 111 | 0.111 |