| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAAAAGAAAA AATTAAAAAA AGAAAAAAAA (2) GTGGCGCACG TGGTTGCTGG
| 306.6 | 0.3066 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAAGAAAA AATTAAAAAA AGAAAAAAAA (2) GTGGCGCACG GTTTTGTGCA TGGTTGCTGG
| 980.4 | 0.9804 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAAAGAAAA AATTAAAAAA AGAAAAAAAA (2) CTATATGTAA GACTCACTCA (2) GTGGCGCACG TGGTTGCTGG
| 282.9 | 0.2829 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAAGAAAA AATTAAAAAA AGAAAAAAAA (2) GTGGCGCACG GTTTTGTGCA TAATAAAAAG TGGTTGCTGG
| 390 | 0.39 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AGAAAAAAAA (2) GTGGCGCACG TGGTTGCTGG
| 315.4 | 0.3154 |
| E15 cortex | AAAAAAAAAA (2) AGAAAAAAAA (2) GTGGCGCACG GTTTTGTGCA TGGTTGCTGG
| 623.4 | 0.6234 |
| P1 cortex | AAAAAAAAAA (2) AGAAAAAAAA (2) GTGGCGCACG TGGTTGCTGG
| 359.1 | 0.3591 |
| Hypothalamus | AAAAAAAAAA (2) AGAAAAAAAA (2) CTATATGTAA GTGGCGCACG TAATAAAAAG TGGTTGCTGG
| 512.6 | 0.5126 |
| E12.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CCACCTTCCT (2) CTATATGTAA GACTCACTCA (2) GTGGCGCACG TGGTTGCTGG
| 334.3 | 0.3343 |
| E14.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CCACCTTCCT (2) CTATATGTAA GTGGCGCACG TGGTTGCTGG
| 1085.8 | 1.0858 |
| E16.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AATTAAAAAA AGAAAAAAAA (2) CCACCTTCCT (2) GACTCACTCA (2) GTGGCGCACG TGGTTGCTGG
| 856.7 | 0.8567 |
| E18.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTATATGTAA GTGGCGCACG TGGTTGCTGG
| 671.1 | 0.6711 |
| P0.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CCACCTTCCT (2) GACTCACTCA (2) GTGGCGCACG TAATAAAAAG TGGTTGCTGG
| 359.2 | 0.3592 |
| P2.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTATATGTAA GACTCACTCA (2) GTGGCGCACG TGGTTGCTGG
| 536.8 | 0.5368 |
| P4.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTATATGTAA GTGGCGCACG GTTTTGTGCA TGGTTGCTGG
| 493.4 | 0.4934 |
| P6.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) GACTCACTCA (2) GTGGCGCACG TGGTTGCTGG
| 476.8 | 0.4768 |
| P10.5 crx- retina | AAAAAAAAAA (2) AGAAAAAAAA (2) GTGGCGCACG TAATAAAAAG TGGTTGCTGG
| 347.4 | 0.3474 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTATATGTAA GTGGCGCACG TGGTTGCTGG
| 238.4 | 0.2384 |
| Adult retinal | AAAAAAAAAA (2) AGAAAAAAAA (2) GACTCACTCA (2) GTGGCGCACG TGGTTGCTGG
| 303.7 | 0.3037 |
| ONL | AAAAAAAAAA (2) AAAAAGAAAA AATTAAAAAA AGAAAAAAAA (2) CTATATGTAA GTGGCGCACG TGGTTGCTGG
| 553.5 | 0.5535 |