| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 208.8 | 0.2088 |
| Cb medulloblastoma | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 807 | 0.807 |
| P8 GC+1d culture | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 210 | 0.21 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) CTGTTCTGTA (2) GTTTCAGGCA TGTAAAAAAA (2)
| 292.8 | 0.2928 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 217.7 | 0.2177 |
| P1 cortex | AAAAAAAAAA (2) TAAAATGAAG (2) TGTAAAAAAA (2)
| 254.4 | 0.2544 |
| Hypothalamus | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 128.6 | 0.1286 |
| E12.5 retina | AAAAAAAAAA (2) TAAAATGAAG (2) TGTAAAAAAA (2) TGTTAAAAAA
| 146.5 | 0.1465 |
| E14.5 retina | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 100.2 | 0.1002 |
| E16.5 retina | AAAAAAAAAA (2) CTGTTCTGTA (2) GTTTCAGGCA TGTAAAAAAA (2)
| 50.7 | 0.0507 |
| E18.5 retina | AAAAAAAAAA (2) TGTAAAAAAA (2) TGTTAAAAAA
| 391.1 | 0.3911 |
| P0.5 retina | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 121.7 | 0.1217 |
| P2.5 retina | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 332.6 | 0.3326 |
| P4.5 retina | AAAAAAAAAA (2) TGTAAAAAAA (2)
| 295.2 | 0.2952 |
| P6.5 retina | AAAAAAAAAA (2) CTGTTCTGTA (2) TGTAAAAAAA (2)
| 275.1 | 0.2751 |
| P10.5 crx- retina | AAAAAAAAAA (2)
| 44.6 | 0.0446 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CTGTTCTGTA (2) TAAAATGAAG (2) TGTAAAAAAA (2) TGTTAAAAAA
| 109.5 | 0.1095 |
| Adult retinal | AAAAAAAAAA (2) CTGTTCTGTA (2) GTTTCAGGCA TGTAAAAAAA (2)
| 68.5 | 0.0685 |
| ONL | AAAAAAAAAA (2) CTGTTCTGTA (2) TGTAAAAAAA (2)
| 111 | 0.111 |