| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA
| 65.4 | 0.0654 |
| Cb medulloblastoma | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA
| 252 | 0.252 |
| P8 GC+1d culture | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA GGAAGGCCAG TGAGGGCAAA
| 63.9 | 0.0639 |
| P8 GC+SHH+1d culture | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA GGAAGGCCAG TGAGGGCAAA
| 98.4 | 0.0984 |
| 3T3 fibroblasts | GCTGCCCTGG (2)
| 3.5 | 0.0035 |
| E15 cortex | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGGA
| 74.1 | 0.0741 |
| P1 cortex | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAGCTGGAT
| 59 | 0.059 |
| Hypothalamus | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA GGAAGGCCAG TGAGGGCAAA
| 105 | 0.105 |
| E12.5 retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA
| 58.2 | 0.0582 |
| E14.5 retina | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGGCCAG TGGTTGCTGC (2)
| 61.8 | 0.0618 |
| E16.5 retina | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA TGAGGGCAAA TGGTTGCTGC (2)
| 36.1 | 0.0361 |
| E18.5 retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) TGGTTGCTGC (2)
| 94.6 | 0.0946 |
| P0.5 retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGGA GGAAGGCCAG GGAGCTGGAT
| 56.9 | 0.0569 |
| P2.5 retina | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA TGGCTTCTTG
| 126.7 | 0.1267 |
| P4.5 retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA GGAAGGCCAG GGAGCTGGAT TGGCTTCTTG
| 97.1 | 0.0971 |
| P6.5 retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA GGAAGGCCAG TGGCTTCTTG
| 78.3 | 0.0783 |
| P10.5 crx- retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA TGAGGGCAAA
| 26.1 | 0.0261 |
| P10.5 crx+ retina | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) TGGCTTCTTG
| 71.1 | 0.0711 |
| Adult retinal | GAAAAAAAAA (2) GCTGCCCTGG (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGGCCAG TGGTTGCTGC (2)
| 42.8 | 0.0428 |
| ONL | GAAAAAAAAA (2) GGAAAAAAAA (2) GGAAGATGAA (2) GGAAGATGGA GGAAGGCCAG TGGCTTCTTG
| 55.4 | 0.0554 |