Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28326
D8Ertd354e
DNA segment, Chr 8, ERATO Doi 354, expressed
8
8 8.0 cM
52120
Gene Ontology
integral to membrane
Human Homolog
FLJ32731[hypothetical protein FLJ32731]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGATTCTCA
CCTTTAATCC (
3
)
GTCACAGACT
60.3
0.0603
Cb medulloblastoma
CCTTTAATCC (
3
)
GTCACAGACT
46.2
0.0462
P8 GC+1d culture
CCTTTAATCC (
3
)
GTCACAGACT
TACATATATA (
5
)
41.1
0.0411
P8 GC+SHH+1d culture
CCTTTAATCC (
3
)
GTCACAGACT
TACATATATA (
5
)
31.7
0.0317
3T3 fibroblasts
CCTTTAATCC (
3
)
GTCACAGACT
73.6
0.0736
E15 cortex
AGGATTCTCA
CCTTTAATCC (
3
)
59.3
0.0593
P1 cortex
CCTTTAATCC (
3
)
TACATATATA (
5
)
163.6
0.1636
Hypothalamus
AGGATTCTCA
CCTTTAATCC (
3
)
21.7
0.0217
E12.5 retina
CCTTTAATCC (
3
)
GTCACAGACT
78.9
0.0789
E14.5 retina
CCTTTAATCC (
3
)
GTCACAGACT
123.9
0.1239
E16.5 retina
CCTTTAATCC (
3
)
GTCACAGACT
TACATATATA (
5
)
72.4
0.0724
E18.5 retina
CCTTTAATCC (
3
)
23.6
0.0236
P0.5 retina
CCTTTAATCC (
3
)
72.6
0.0726
P2.5 retina
CCTTTAATCC (
3
)
GTCACAGACT
75.7
0.0757
P4.5 retina
CCTTTAATCC (
3
)
GTCACAGACT
49.5
0.0495
P6.5 retina
AGGATTCTCA
CCTTTAATCC (
3
)
GTCACAGACT
75
0.075
P10.5 crx- retina
AGGATTCTCA
CCTTTAATCC (
3
)
GTCACAGACT
70.6
0.0706
P10.5 crx+ retina
CCTTTAATCC (
3
)
GTCACAGACT
40.3
0.0403
Adult retinal
CCTTTAATCC (
3
)
GTCACAGACT
131.5
0.1315
ONL
CCTTTAATCC (
3
)
GTCACAGACT
92
0.092
