| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTTTGGGGG GGAGACGAAA TAATAAATAA (2)
| 24.5 | 0.0245 |
| Cb medulloblastoma | ATTTTGGGGG GCCGGGGACA (3) TAATAAATAA (2) TGGTAAAAAA
| 20.7 | 0.0207 |
| P8 GC+1d culture | ATTTTGGGGG GCCGGGGACA (3) TAATAAATAA (2) TGGTAAAAAA
| 38.8 | 0.0388 |
| P8 GC+SHH+1d culture | ATTTTGGGGG CAAACAATAT GCCGGGGACA (3) GGAGACGAAA TAATAAATAA (2) TGGTAAAAAA
| 43.5 | 0.0435 |
| 3T3 fibroblasts | ATTTTGGGGG
| 7 | 0.007 |
| E15 cortex | ATTTTGGGGG
| 19.8 | 0.0198 |
| P1 cortex | ATTTTGGGGG
| 27.3 | 0.0273 |
| Hypothalamus | ATTTTGGGGG TAATAAATAA (2)
| 45.3 | 0.0453 |
| E12.5 retina | ATTTTGGGGG GGAGACGAAA TAATAAATAA (2)
| 50.7 | 0.0507 |
| E14.5 retina | ATTTTGGGGG TAATAAATAA (2) TGGTAAAAAA
| 65.5 | 0.0655 |
| E16.5 retina | ATTTTGGGGG TAATAAATAA (2)
| 39.8 | 0.0398 |
| E18.5 retina | CAAACAATAT TAATAAATAA (2)
| 94.6 | 0.0946 |
| P0.5 retina | ATTTTGGGGG TAATAAATAA (2) TGGTAAAAAA
| 39.3 | 0.0393 |
| P2.5 retina | ATTTTGGGGG TAATAAATAA (2)
| 75.7 | 0.0757 |
| P4.5 retina | ATTTTGGGGG TAATAAATAA (2)
| 83.2 | 0.0832 |
| P6.5 retina | ATTTTGGGGG TAATAAATAA (2)
| 71.7 | 0.0717 |
| P10.5 crx- retina | ATTTTGGGGG CAAACAATAT TAATAAATAA (2)
| 31.6 | 0.0316 |
| P10.5 crx+ retina | ATTTTGGGGG GGAGACGAAA TAATAAATAA (2) TGGTAAAAAA
| 25 | 0.025 |
| Adult retinal | AACAGGCAGT (2) ATTTTGGGGG TAATAAATAA (2) TGGTAAAAAA
| 16.8 | 0.0168 |
| ONL | ATTTTGGGGG TAATAAATAA (2)
| 24.9 | 0.0249 |