Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284594	Tjp4	tight junction protein 4 (peripheral)	17		74094
Gene Ontology	biological_process unknown | protein binding | tight junction
Human Homolog	TJP4[tight junction protein 4 (peripheral)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCAGTGGTG (3) AGTGGGGGTG (3) GGGAGTGTTG TGATGCAGGG 34.2 0.0342 Cb medulloblastoma AGCAGTGGTG (3) AGTGGGGGTG (3) GGGAGTGTTG 25.4 0.0254 P8 GC+1d culture AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG TTGATGGCAG 70.7 0.0707 P8 GC+SHH+1d culture AGCAGTGGTG (3) AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG 39.9 0.0399 3T3 fibroblasts AGCAGTGGTG (3) TTGATGGCAG 10.5 0.0105 E15 cortex AGTGGGGGTG (3) GGGAGTGTTG 49.5 0.0495 P1 cortex AGTGGGGGTG (3) GGGAGTGTTG 50 0.05 Hypothalamus AGCAGTGGTG (3) AGTGGGGGTG (3) GGGAGTGTTG TGATGCAGGG 39.8 0.0398 E12.5 retina AGCAGTGGTG (3) AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG TTGATGGCAG 17 0.017 E14.5 retina AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG TTGATGGCAG 20 0.02 E16.5 retina AGTGGGGGTG (3) GGGAGTGTTG TTGATGGCAG 36.2 0.0362 E18.5 retina AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG 25.4 0.0254 P0.5 retina AGTGGGGGTG (3) GGGAGTGTTG TGATGCAGGG 35.3 0.0353 P2.5 retina AGCAGTGGTG (3) AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG TGATGCAGGG 44.1 0.0441 P4.5 retina AGTGGGGGTG (3) GGGAGTGTTG TTGATGGCAG 35.7 0.0357 P6.5 retina AGCAGTGGTG (3) AGTGGGGGTG (3) GGGAGTGTTG 50.1 0.0501 P10.5 crx- retina AGCAGTGGTG (3) AGTGGGGGTG (3) GGGAGTGTTG TTGATGGCAG 63.2 0.0632 P10.5 crx+ retina AGCAGTGGTG (3) AGTGGGGGTG (3) CAGAGGCAGA (2) GGGAGTGTTG 48 0.048 Adult retinal AGCAGTGGTG (3) AGTGGGGGTG (3) GGGAGTGTTG TTGATGGCAG 48.2 0.0482 ONL AGCAGTGGTG (3) AGTGGGGGTG (3) 7.6 0.0076