| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGACATCTG (2) TGTCAGTTGT (6)
| 9.8 | 0.0098 |
| Cb medulloblastoma | AAGACATCTG (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AAGACATCTG (2) CTGTCAGTGA TGAAAGTGGT
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | AAGACATCTG (2) TGAAAGTGGT TGGTGTGTGC (2) TGTCAGTTGT (6)
| 9.4 | 0.0094 |
| 3T3 fibroblasts | TGTCAGTTGT (6)
| 7 | 0.007 |
| E15 cortex | AAGACATCTG (2) TGTCAGTTGT (6)
| 9.8 | 0.0098 |
| P1 cortex | TGAAAGTGGT
| 9.1 | 0.0091 |
| Hypothalamus | AAGACATCTG (2)
| 12.7 | 0.0127 |
| E12.5 retina | AAGACATCTG (2) CTGTCAGTGA
| 11.3 | 0.0113 |
| E14.5 retina | AAGACATCTG (2) TGTCAGTTGT (6)
| 9.1 | 0.0091 |
| E16.5 retina | AAGACATCTG (2) TGTCAGTTGT (6)
| 9 | 0.009 |
| E18.5 retina | AAGACATCTG (2)
| 7.3 | 0.0073 |
| P0.5 retina | TGTCAGTTGT (6)
| 2 | 0.002 |
| P2.5 retina | AAGACATCTG (2) CTGTCAGTGA TGTCAGTTGT (6)
| 12.4 | 0.0124 |
| P4.5 retina | AAGACATCTG (2) AATGAGTTGC (3) TGTCAGTTGT (6)
| 11.9 | 0.0119 |
| P6.5 retina | AAGACATCTG (2) TGGTGTGTGC (2) TGTCAGTTGT (6)
| 15.1 | 0.0151 |
| P10.5 crx- retina | AAGACATCTG (2) TGGTGTGTGC (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AATGAGTTGC (3) CTGTCAGTGA TGAAAGTGGT TGTCAGTTGT (6)
| 9.5 | 0.0095 |
| Adult retinal | AAGACATCTG (2) TGTCAGTTGT (6)
| 7.5 | 0.0075 |
| ONL | AATGAGTTGC (3)
| 1.9 | 0.0019 |