Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28474
1110007A06Rik
RIKEN cDNA 1110007A06 gene
6
68477
Human Homolog
FLJ13910[hypothetical protein FLJ13910]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTTCTTCTG
(
4
)
TCTGTACCAC
14.7
0.0147
Cb medulloblastoma
GCTTCTTCTG
(
4
)
TCTTCTCTCA
25.4
0.0254
P8 GC+1d culture
AGAAAATGAA
GCTTCTTCTG
(
4
)
TATCTCTTCA
TCTTCTCTCA
18.2
0.0182
P8 GC+SHH+1d culture
GCTTCTCTGT
(
2
)
GCTTCTTCTG
(
4
)
TCTGTACCAC
12.9
0.0129
3T3 fibroblasts
GCTTCTTCTG
(
4
)
7
0.007
E15 cortex
GCTTCTTCTG
(
4
)
4.9
0.0049
P1 cortex
GCTTCTTCTG
(
4
)
4.5
0.0045
Hypothalamus
GCTTCTTCTG
(
4
)
TATCTCTTCA
9
0.009
E12.5 retina
GCTTCTTCTG
(
4
)
TATCTCTTCA
TCTGTACCAC
9.4
0.0094
E14.5 retina
AGAAAATGAA
GCTTCTTCTG
(
4
)
7.3
0.0073
E16.5 retina
GCTTCTTCTG
(
4
)
12.7
0.0127
E18.5 retina
GCTTCTCTGT
(
2
)
GCTTCTTCTG
(
4
)
TCTTCTCTCA
14.5
0.0145
P0.5 retina
GCTTCTTCTG
(
4
)
TCTTCTCTCA
9.8
0.0098
P2.5 retina
AGAAAATGAA
GCTTCTTCTG
(
4
)
TCTGTACCAC
TCTTCTCTCA
19.5
0.0195
P4.5 retina
AGAAAATGAA
GCTTCTTCTG
(
4
)
13.9
0.0139
P6.5 retina
GCTTCTTCTG
(
4
)
TCTTCTCTCA
20
0.02
P10.5 crx- retina
GCTTCTTCTG
(
4
)
TCTTCTCTCA
9.3
0.0093
P10.5 crx+ retina
GCTTCTTCTG
(
4
)
TCTTCTCTCA
15.4
0.0154
Adult retinal
GCTTCTTCTG
(
4
)
TCTTCTCTCA
3.8
0.0038
ONL
GCTTCTCTGT
(
2
)
GCTTCTTCTG
(
4
)
TATCTCTTCA
TCTTCTCTCA
17.2
0.0172
