| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGTTCCAGGA (2) CAAGAACAAA (2) TAAAAAAAAA (3)
| 52.2 | 0.0522 |
| Cb medulloblastoma | CAGACACAGT TAAAAAAAAA (3) TACTATAAAG
| 111 | 0.111 |
| P8 GC+1d culture | AGTTCCAGGA (2) CAAGAACAAA (2) TAAAAAAAAA (3)
| 69.6 | 0.0696 |
| P8 GC+SHH+1d culture | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 96 | 0.096 |
| 3T3 fibroblasts | TAAAAAAAAA (3)
| 7 | 0.007 |
| E15 cortex | CAAGAACAAA (2) TAAAAAAAAA (3)
| 14.8 | 0.0148 |
| P1 cortex | TAAAAAAAAA (3)
| 50 | 0.05 |
| Hypothalamus | TAAAAAAAAA (3) TACTATAAAG
| 36.2 | 0.0362 |
| E12.5 retina | AGTTCCAGGA (2) CAGACACAGT TAAAAAAAAA (3)
| 28.2 | 0.0282 |
| E14.5 retina | AGTTCCAGGA (2) CAGACACAGT TAAAAAAAAA (3)
| 45.5 | 0.0455 |
| E16.5 retina | CAAGAACAAA (2) TAAAAAAAAA (3)
| 25.3 | 0.0253 |
| E18.5 retina | AGTTCCAGGA (2) CAAGAACAAA (2) TAAAAAAAAA (3)
| 112.7 | 0.1127 |
| P0.5 retina | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 39.3 | 0.0393 |
| P2.5 retina | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 74 | 0.074 |
| P4.5 retina | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 130.7 | 0.1307 |
| P6.5 retina | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 66.7 | 0.0667 |
| P10.5 crx- retina | AGTTCCAGGA (2) CAAGAACAAA (2) TAAAAAAAAA (3)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | AGTTCCAGGA (2) CAAGAACAAA (2) TAAAAAAAAA (3) TACTATAAAG
| 30.7 | 0.0307 |
| Adult retinal | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 20.4 | 0.0204 |
| ONL | AGTTCCAGGA (2) TAAAAAAAAA (3)
| 38.3 | 0.0383 |