Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285454	Spop	speckle-type POZ protein	11	11 55.6 cM	20747
Gene Ontology	mRNA processing | nucleus | protein binding
Human Homolog	SPOP[speckle-type POZ protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATATGGAGA CTTCGGATGT GAAAAGACTG (5) TTTTTTTTTT (2) 9.7 0.0097 Cb medulloblastoma AATATGGAGA AATGTGGAGA TTTTTTTTTT (2) 9.2 0.0092 P8 GC+1d culture AATATGGAGA CTTCGGATGT CTTTTATCCT GCTGGCAGCT (2) TTTTTTTTTT (2) 24 0.024 P8 GC+SHH+1d culture AATATGGAGA ACCCAGACTT CTTCGGATGT GCTGGCAGCT (2) TTTTTTTTTT (2) 15.2 0.0152 3T3 fibroblasts CTTCGGATGT CTTTTATCCT GCTGGCAGCT (2) 28 0.028 E15 cortex TTTTTTTTTT (2) 4.9 0.0049 P1 cortex AATATGGAGA CTTCGGATGT GCTGGCAGCT (2) TTTTTTTTTT (2) 18 0.018 Hypothalamus CTTCGGATGT TTTTTTTTTT (2) 10.8 0.0108 E12.5 retina AAGAGCTGGA (3) CTTCGGATGT TTTTTTTTTT (2) 11.3 0.0113 E14.5 retina TGGACCATCA (2) TTTTTTTTTT (2) 25.5 0.0255 E16.5 retina AATATGGAGA CTTCGGATGT GAAAAGACTG (5) TTTTTTTTTT (2) 14.4 0.0144 E18.5 retina AATATGGAGA CTTCGGATGT GCTGGCAGCT (2) TGGACCATCA (2) TTTTTTTTTT (2) 19.9 0.0199 P0.5 retina AAGAGCTGGA (3) CTTCGGATGT TTTTTTTTTT (2) 15.7 0.0157 P2.5 retina AAGAGCTGGA (3) CTTCGGATGT TTTTTTTTTT (2) 10.6 0.0106 P4.5 retina AATATGGAGA CTTCGGATGT GAAAAGACTG (5) TTTTTTTTTT (2) 17.9 0.0179 P6.5 retina AATATGGAGA CTTCGGATGT TTTTTTTTTT (2) 15 0.015 P10.5 crx- retina AATATGGAGA ACCCAGACTT 5.6 0.0056 P10.5 crx+ retina AATATGGAGA AATGTGGAGA CTTCGGATGT CTTTTATCCT TGGACCATCA (2) TTTTTTTTTT (2) 15.2 0.0152 Adult retinal AATATGGAGA CTTCGGATGT GAAAAGACTG (5) GCTGGCAGCT (2) TTTTTTTTTT (2) 27.9 0.0279 ONL AATATGGAGA AATGTGGAGA CTTCGGATGT GCTGGCAGCT (2) TTTTTTTTTT (2) 22.9 0.0229