| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACTGGAAT (2) ACTCTGAATT GTGGCCGCAA TGTTTCTAAC
| 14.7 | 0.0147 |
| Cb medulloblastoma | AAACTGGAAT (2) ACTCTGAATT TGTTTCTAAC
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAACTGGAAT (2) ACTCTGAATT GTGGCCGCAA TGTTTCTAAC
| 13.7 | 0.0137 |
| P8 GC+SHH+1d culture | AAACTGGAAT (2) ACTCTGAATT ATTAAACCTG TGTTTCTAAC
| 15.3 | 0.0153 |
| 3T3 fibroblasts | CCGGATGTTG CTGGGCAAGC (2) GTGGCCGCAA
| 17.5 | 0.0175 |
| E15 cortex | AAACTGGAAT (2) CCGGATGTTG
| 29.6 | 0.0296 |
| P1 cortex | ACTCTGAATT ATTAAACCTG CTGGGCAAGC (2) GTGGCCGCAA TGTTTCTAAC
| 22.5 | 0.0225 |
| Hypothalamus | AAACTGGAAT (2) ACTCTGAATT ATTAAACCTG CTGGGCAAGC (2) TGTTTCTAAC
| 12.6 | 0.0126 |
| E12.5 retina | AAACTGGAAT (2) ACTCTGAATT ATTAAACCTG
| 15.1 | 0.0151 |
| E14.5 retina | AAACTGGAAT (2) ACTCTGAATT ACTTCAGGAT TGTTTCTAAC
| 18.1 | 0.0181 |
| E16.5 retina | AAACTGGAAT (2) ACTCTGAATT ACTTCAGGAT ATTAAACCTG GTGGCCGCAA TGTTTCTAAC
| 29 | 0.029 |
| E18.5 retina | AAACTGGAAT (2) ACTCTGAATT GTGGCCGCAA
| 10.9 | 0.0109 |
| P0.5 retina | AAACTGGAAT (2) ATTAAACCTG TGTTTCTAAC
| 6 | 0.006 |
| P2.5 retina | ACTCTGAATT ATTAAACCTG TGTTTCTAAC
| 5.4 | 0.0054 |
| P4.5 retina | AAACTGGAAT (2) ACTCTGAATT GTGGCCGCAA
| 9.9 | 0.0099 |
| P6.5 retina | AAACTGGAAT (2) ACTCTGAATT GTGGCCGCAA
| 8.3 | 0.0083 |
| P10.5 crx- retina | AAACTGGAAT (2) ACTTCAGGAT
| 9.3 | 0.0093 |
| P10.5 crx+ retina | ACTCTGAATT ATTAAACCTG CTGGGCAAGC (2) GTGGCCGCAA TGTTTCTAAC
| 17.2 | 0.0172 |
| Adult retinal | ACTCTGAATT ATTAAACCTG CTGGGCAAGC (2)
| 5.7 | 0.0057 |
| ONL | CTGGGCAAGC (2) TGTTTCTAAC
| 3.8 | 0.0038 |