Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.286187	Bbs7	Bardet-Biedl syndrome 7	3		71492
Gene Ontology	ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | proton-transporting two-sector ATPase complex
Human Homolog	BBS7[Bardet-Biedl syndrome 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCTGCAT (2) GGTACTCGTG 9.8 0.0098 Cb medulloblastoma GCCTCTGCAT (2) TAAAATCAAA 9.2 0.0092 P8 GC+1d culture AAGAAAGGAG (2) GCCTCTGCAT (2) GGTACTCGTG TAAAATCAAA 26.1 0.0261 P8 GC+SHH+1d culture AAAGTCCTTT AAGAAAGGAG (2) GCCTCTGCAT (2) GGTACTCGTG 15.3 0.0153 3T3 fibroblasts AAGAAAGGAG (2) GCCTCTGCAT (2) 17.5 0.0175 E15 cortex GCCTCTGCAT (2) 39.6 0.0396 P1 cortex GCCTCTGCAT (2) GGTACTCGTG 22.7 0.0227 Hypothalamus GCCTCTGCAT (2) GGTACTCGTG TAAAATCAAA 14.5 0.0145 E12.5 retina AAAGTCCTTT GCCTCTGCAT (2) GGTACTCGTG 15.1 0.0151 E14.5 retina GCCTCTGCAT (2) 14.6 0.0146 E16.5 retina AAGAAAGGAG (2) GCCTCTGCAT (2) GGTACTCGTG 23.5 0.0235 E18.5 retina GCCTCTGCAT (2) TAAAATCAAA 12.7 0.0127 P0.5 retina AAGAAAGGAG (2) GCCTCTGCAT (2) 25.6 0.0256 P2.5 retina AAAGTCCTTT GCCTCTGCAT (2) GGTACTCGTG 35.3 0.0353 P4.5 retina GCCTCTGCAT (2) 19.8 0.0198 P6.5 retina AAAGTCCTTT GCCTCTGCAT (2) 23.4 0.0234 P10.5 crx- retina AAAGTCCTTT GCCTCTGCAT (2) GGTACTCGTG 46.5 0.0465 P10.5 crx+ retina AAAGTCCTTT GCCTCTGCAT (2) GGTACTCGTG TAAAATCAAA 38.4 0.0384 Adult retinal AAAGTCCTTT GCCTCTGCAT (2) 37 0.037 ONL AAAGTCCTTT AAGAAAGGAG (2) GCCTCTGCAT (2) TAAAATCAAA 24.8 0.0248