Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.286353
Tbc1d1
TBC1 domain family, member 1
5
5 C3.1
57915
Mm.286353
AU022322
expressed sequence AU022322
5
100827
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 4 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTTGGGTTTT
TCCAAAATTC
TTATTACTGT
(
3
)
8.1
0.0081
Cb medulloblastoma
TTATTACTGT
(
3
)
2.3
0.0023
P8 GC+1d culture
GTTGGGTTTT
TGGGAGTCTT
(
2
)
5.7
0.0057
P8 GC+SHH+1d culture
GTTGGGTTTT
TCCAAAATTC
TGGGAGTCTT
(
2
)
TTATTACTGT
(
3
)
4.8
0.0048
E15 cortex
GGTGATGGGG
(
2
)
TCCAAAATTC
9.8
0.0098
P1 cortex
TTATTACTGT
(
3
)
4.5
0.0045
Hypothalamus
AGGAAGGAAG
(
3
)
TGGGAGTCTT
(
2
)
3.6
0.0036
E12.5 retina
AATAAATTAC
(
2
)
GGTGATGGGG
(
2
)
TTATTACTGT
(
3
)
5.7
0.0057
E14.5 retina
AATAAATTAC
(
2
)
1.8
0.0018
E16.5 retina
AATAAATTAC
(
2
)
TCCAAAATTC
9
0.009
E18.5 retina
AATAAATTAC
(
2
)
21.8
0.0218
P0.5 retina
AATAAATTAC
(
2
)
TTATTACTGT
(
3
)
5.9
0.0059
P2.5 retina
AATAAATTAC
(
2
)
GTTGGGTTTT
19.3
0.0193
P4.5 retina
AATAAATTAC
(
2
)
AGGAAGGAAG
(
3
)
GTTGGGTTTT
23.8
0.0238
P6.5 retina
AATAAATTAC
(
2
)
43.4
0.0434
P10.5 crx- retina
AATAAATTAC
(
2
)
GTTGGGTTTT
14.8
0.0148
P10.5 crx+ retina
AATAAATTAC
(
2
)
AGGAAGGAAG
(
3
)
GGTGATGGGG
(
2
)
30.7
0.0307
Adult retinal
AATAAATTAC
(
2
)
9.3
0.0093
ONL
AATAAATTAC
(
2
)
GTTGGGTTTT
30.6
0.0306
