Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.286593 Smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 9  9 6.0 cM  20586 
 Gene Ontology ATP binding | ATP dependent helicase activity | ATPase activity | DNA binding | helicase activity | nucleic acid binding | nucleosome assembly | nucleus | organogenesis | protein binding | SWI/SNF complex
 Human Homolog SMARCA4[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCAATCTTCCA
CCAACACTGA (4)
CCTTCAGTCC (2)
CGCGTGCCGG
TACCAGCACA
TCAAAAAAAG
360.036
Cb medulloblastomaCGCGTGCCGG
TACCAGCACA
TCAGACCTGC (3)
11.50.0115
P8 GC+1d cultureCAATCTTCCA
CCTTCAGTCC (2)
CGCGTGCCGG
GACTCACTCA (2)
GAGAGGAGGA (3)
TCAAAAAAAG
45.50.0455
P8 GC+SHH+1d cultureCCTTCAGTCC (2)
CGCGTGCCGG
TACCAGCACA
TCAAAAAAAG
TGTACAGTTC
51.60.0516
3T3 fibroblastsCCAACACTGA (4)
CGCGTGCCGG
TACCAGCACA
490.049
E15 cortexCCAACACTGA (4)
CGCGTGCCGG
GAGAGGAGGA (3)
TACCAGCACA
TGAAGAGGAA (2)
143.30.1433
P1 cortexCCAACACTGA (4)
CGCGTGCCGG
36.30.0363
HypothalamusCCAACACTGA (4)
CGCGTGCCGG
GCCTTGGACC (2)
TACCAGCACA
16.20.0162
E12.5 retinaCCTTCAGTCC (2)
CGCGTGCCGG
GACTCACTCA (2)
TACCAGCACA
37.60.0376
E14.5 retinaCATCCACTGA
CCAACACTGA (4)
CGCGTGCCGG
GAGAGGAGGA (3)
TACCAGCACA
TCAAAAAAAG
43.60.0436
E16.5 retinaAAAGTGCCAA
CATCCACTGA
CCCTCAGTCC
CGCGTGCCGG
CTGTGCCCAC
GACTCACTCA (2)
GCCTTGGACC (2)
TACCAGCACA
TGAAGAGGAA (2)
TGTACAGTTC
66.80.0668
E18.5 retinaCGCGTGCCGG
TACCAGCACA
21.80.0218
P0.5 retinaCCTTCAGTCC (2)
CGCGTGCCGG
CTGTGCCCAC
GACTCACTCA (2)
TACCAGCACA
TGAAGAGGAA (2)
49.10.0491
P2.5 retinaCATCCACTGA
CCCTCAGTCC
CCTTCAGTCC (2)
CGCGTGCCGG
CTGTGCCCAC
GACTCACTCA (2)
GCCTTGGACC (2)
TACCAGCACA
49.50.0495
P4.5 retinaCCAACACTGA (4)
CCCTCAGTCC
CGCGTGCCGG
GCCTTGGACC (2)
TACCAGCACA
41.70.0417
P6.5 retinaCCAACACTGA (4)
CCTTCAGTCC (2)
CGCGTGCCGG
GACTCACTCA (2)
TACCAGCACA
31.70.0317
P10.5 crx- retinaAAAGTGCCAA
CCAACACTGA (4)
CGCGTGCCGG
TGAAGAGGAA (2)
22.40.0224
P10.5 crx+ retinaCCAACACTGA (4)
CCTTCAGTCC (2)
CGCGTGCCGG
CTGTGCCCAC
TACCAGCACA
40.30.0403
Adult retinalCGCGTGCCGG
CTGTGCCCAC
GACTCACTCA (2)
TACCAGCACA
TGTACAGTTC
33.50.0335
ONLCCTTCAGTCC (2)
CGCGTGCCGG
3.80.0038