| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAACCAAA GAAATTTAAA GCTATACAGA
| 14.6 | 0.0146 |
| Cb medulloblastoma | AAAAACCAAA CTGGCACCTT GAAATCTAAA GAAATTTAAA GATGTAGCCC
| 16.1 | 0.0161 |
| P8 GC+1d culture | GAAATTTAAA GATGTAGCCC GGCAGCCCCA (2)
| 38.7 | 0.0387 |
| P8 GC+SHH+1d culture | CTGGCACCTT GAAATCTAAA GAAATTTAAA GATGTAGCCC GCTATACAGA
| 65.6 | 0.0656 |
| 3T3 fibroblasts | GAAATTTAAA GATGTAGCCC
| 10.5 | 0.0105 |
| E15 cortex | AAAAACCAAA GAAATTTAAA GCTATACAGA GGCAGCCCCA (2)
| 59.2 | 0.0592 |
| P1 cortex | AAAAACCAAA GAAATTTAAA GCTATACAGA
| 49.9 | 0.0499 |
| Hypothalamus | GAAATTTAAA GCTATACAGA
| 7.2 | 0.0072 |
| E12.5 retina | AAAAACCAAA CTGGCACCTT GAAATCTAAA GAAATTTAAA GATGTAGCCC GCTATACAGA
| 90.2 | 0.0902 |
| E14.5 retina | GAAATCTAAA GAAATTTAAA GCTATACAGA
| 25.5 | 0.0255 |
| E16.5 retina | AAAAACCAAA GAAATTTAAA
| 29 | 0.029 |
| E18.5 retina | AAAAACCAAA GAAATCTAAA GAAATTTAAA
| 56.4 | 0.0564 |
| P0.5 retina | GAAATTTAAA GCTATACAGA
| 41.3 | 0.0413 |
| P2.5 retina | GAAATTTAAA GATGTAGCCC
| 70.4 | 0.0704 |
| P4.5 retina | AAAAACCAAA GAAATTTAAA
| 47.6 | 0.0476 |
| P6.5 retina | GAAATTTAAA GCTATACAGA
| 21.7 | 0.0217 |
| P10.5 crx- retina | AAAAACCAAA GAAATTTAAA GCTATACAGA
| 9.4 | 0.0094 |
| P10.5 crx+ retina | AAAAACCAAA GAAATTTAAA GCTATACAGA GGCAGCCCCA (2)
| 19.1 | 0.0191 |
| Adult retinal | GAAATTTAAA GCTATACAGA
| 5.6 | 0.0056 |
| ONL | GAAATTTAAA GCTATACAGA
| 11.5 | 0.0115 |