| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCTCCACT GAAGCAAAGA (2) GTGGAAGTCA (2) TATTGAAATA TTTTATTACT
| 26 | 0.026 |
| Cb medulloblastoma | GAAGCAAAGA (2)
| 46.2 | 0.0462 |
| P8 GC+1d culture | CATTCTGACA GAAGCAAAGA (2) GTGGAAGTCA (2) TATTGAAATA TCTTTAATCC (2) TGGCTGCACC TTTTATTACT
| 31.8 | 0.0318 |
| P8 GC+SHH+1d culture | AAAGCTCCAC CATTCTGACA GAAGCAAAGA (2) GTGGAAGTCA (2) TATTGAAATA TCTTTAATCC (2) TTTTATTACT
| 32.8 | 0.0328 |
| 3T3 fibroblasts | CATTCTGACA GAAGCAAAGA (2) TCTTTAATCC (2)
| 21 | 0.021 |
| E15 cortex | GAAGCAAAGA (2) TCTTTAATCC (2)
| 14.8 | 0.0148 |
| P1 cortex | GAAGCAAAGA (2) TATTGAAATA TCTTTAATCC (2)
| 27.3 | 0.0273 |
| Hypothalamus | AAAGCTCCAC AAGCTCCACT GAAGCAAAGA (2) TATTGAAATA TGGCTGCACC
| 48.8 | 0.0488 |
| E12.5 retina | AAAGCTCCAC GAAGCAAAGA (2) GTGGAAGTCA (2) TTTTATTACT
| 24.5 | 0.0245 |
| E14.5 retina | GAAGCAAAGA (2) GTGGAAGTCA (2) TATTGAAATA TCTTTAATCC (2) TGGCTGCACC
| 56.4 | 0.0564 |
| E16.5 retina | GAAGCAAAGA (2) TATTGAAATA TCTTTAATCC (2) TGTGCAGGTC
| 65.2 | 0.0652 |
| E18.5 retina | AAGCTCCACT GAAGCAAAAA GAAGCAAAGA (2) TATTGAAATA TCTTTAATCC (2) TGTGCAGGTC TTTTATTACT
| 49 | 0.049 |
| P0.5 retina | AAAGCTCCAC AAGCTCCACT GAAGCAAAGA (2) TCTTTAATCC (2)
| 23.7 | 0.0237 |
| P2.5 retina | CATTCTGACA GAAGCAAAGA (2) GTGGAAGTCA (2) TATTGAAATA TCTTTAATCC (2) TTTTATTACT
| 84.7 | 0.0847 |
| P4.5 retina | AAAGCTCCAC GAAGCAAAAA GAAGCAAAGA (2) GTGGAAGTCA (2) TATTGAAATA TCTTTAATCC (2)
| 93.1 | 0.0931 |
| P6.5 retina | AAAGCTCCAC AAGCTCCACT CATTCTGACA GAAGCAAAGA (2) TATTGAAATA TGGCTGCACC TTTTATTACT
| 80.2 | 0.0802 |
| P10.5 crx- retina | CATTCTGACA GAAGCAAAGA (2) TATTGAAATA TCTTTAATCC (2) TGGCTGCACC TGTGCAGGTC
| 107.9 | 0.1079 |
| P10.5 crx+ retina | AAAGCTCCAC CATTCTGACA GAAGCAAAGA (2) TCTTTAATCC (2) TGTGCAGGTC
| 84.5 | 0.0845 |
| Adult retinal | AAAGCTCCAC GAAGCAAAGA (2) TCTTTAATCC (2)
| 22.3 | 0.0223 |
| ONL | GAAGCAAAGA (2) GTGGAAGTCA (2) TCTTTAATCC (2)
| 42.1 | 0.0421 |