| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TATGTTGCGG TTTTTCCCCT (2)
| 31 | 0.031 |
| Cb medulloblastoma | TATGTTGCGG TTTCCAATGG (2)
| 55.5 | 0.0555 |
| P8 GC+1d culture | TATGTTGCGG TTTTTCCCCT (2)
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | TATGTTGCGG TTTCCAATGG (2) TTTTTCCCCT (2)
| 29.3 | 0.0293 |
| 3T3 fibroblasts | TATGTTGCGG
| 7 | 0.007 |
| E15 cortex | TATGTTGCGG
| 64.3 | 0.0643 |
| P1 cortex | TATGTTGCGG TTTCCAATGG (2)
| 31.8 | 0.0318 |
| Hypothalamus | CAGGTGTGAG TATGTTGCGG TTTCCAATGG (2) TTTTTCCCCT (2)
| 63.3 | 0.0633 |
| E12.5 retina | CAGGTGTGAG TATGTTGCGG TTTTTCCCCT (2)
| 22.6 | 0.0226 |
| E14.5 retina | TATGTTGCGG TTTTTCCCCT (2)
| 30.9 | 0.0309 |
| E16.5 retina | TATGTTGCGG TTTCCAATGG (2) TTTTTCCCCT (2)
| 41.6 | 0.0416 |
| E18.5 retina | CAGGTGTGAG TATGTTGCGG TTTTTCCCCT (2)
| 61.8 | 0.0618 |
| P0.5 retina | TATGTTGCGG
| 37.3 | 0.0373 |
| P2.5 retina | TATGTTGCGG TTTCCAATGG (2) TTTTTCCCCT (2)
| 49.3 | 0.0493 |
| P4.5 retina | TATGTTGCGG TTTTTCCCCT (2)
| 63.4 | 0.0634 |
| P6.5 retina | TATGTTGCGG TTTTTCCCCT (2)
| 53.4 | 0.0534 |
| P10.5 crx- retina | CAGGTGTGAG TATGTTGCGG TTTTTCCCCT (2)
| 37.2 | 0.0372 |
| P10.5 crx+ retina | CAGGTGTGAG TATGTTGCGG TTTTTCCCCT (2)
| 73 | 0.073 |
| Adult retinal | TATGTTGCGG TTTTTCCCCT (2)
| 38.9 | 0.0389 |
| ONL | TATGTTGCGG TTTCCAATGG (2) TTTTTCCCCT (2)
| 30.6 | 0.0306 |