| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGGAAGTG (2) CTGCTTTCCA (4) GCCGAGTCAC TCTTCCAAAT (3)
| 8.1 | 0.0081 |
| Cb medulloblastoma | AAGGGAAGTG (2) CAGGTCTGGG (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | AAGGGAAGTG (2) AGCCAACAGG (3) CAGGTCTGGG (3) CTGACTGGGT (2) CTGCTTTCCA (4) GCCGAGTCAC
| 12.4 | 0.0124 |
| P8 GC+SHH+1d culture | AAGGGAAGTG (2) AGCCAACAGG (3) CTGACTGGGT (2) CTGCTTTCCA (4) GCCGAGTCAC
| 10.6 | 0.0106 |
| 3T3 fibroblasts | AGCCACCAGG (2)
| 3.5 | 0.0035 |
| E15 cortex | CTGCTTTCCA (4)
| 14.8 | 0.0148 |
| P1 cortex | AAGGGAAGTG (2) CTGCTTTCCA (4)
| 9 | 0.009 |
| Hypothalamus | CAGGTCTGGG (3)
| 1.8 | 0.0018 |
| E12.5 retina | CAGGTCTGGG (3) CTGCTTTCCA (4)
| 7.5 | 0.0075 |
| E14.5 retina | AAGGGAAGTG (2) CTGACTGGGT (2) CTGCTTTCCA (4)
| 7.2 | 0.0072 |
| E16.5 retina | AAGGGAAGTG (2) AGCCAACAGG (3) CTGCTTTCCA (4)
| 10.8 | 0.0108 |
| E18.5 retina | GCCGAGTCAC
| 1.8 | 0.0018 |
| P0.5 retina | AAGGGAAGTG (2) CTGCTTTCCA (4)
| 11.8 | 0.0118 |
| P2.5 retina | AAGGGAAGTG (2) CTGCTTTCCA (4)
| 7.1 | 0.0071 |
| P4.5 retina | AGCCAACAGG (3) CTGCTTTCCA (4)
| 13.9 | 0.0139 |
| P6.5 retina | AAGGGAAGTG (2) AGCCAACAGG (3) CTGCTTTCCA (4)
| 11.7 | 0.0117 |
| P10.5 crx- retina | AAGGGAAGTG (2) CTGCTTTCCA (4)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | AAGGGAAGTG (2) AGCCAACAGG (3) AGCCACCAGG (2) CTGCTTTCCA (4) GCCGAGTCAC TCTTCCAAAT (3)
| 17.2 | 0.0172 |
| Adult retinal | AAGGGAAGTG (2) AGCCACCAGG (2) CAGGTCTGGG (3) CTGACTGGGT (2) CTGCTTTCCA (4)
| 9.5 | 0.0095 |
| ONL | AAGGGAAGTG (2)
| 1.9 | 0.0019 |