| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCTCCAACT (2) GTGACAGATG (2) GTGATAGATG (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | CAGAGGGCAA CTGGGATCCA
| 9.2 | 0.0092 |
| P8 GC+1d culture | GTGACAGATG (2)
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | CTGGGATCCA GATTCACCTG GCCTCCAACT (2) GTGACTGATG (2) GTGATAGATG (2)
| 17.7 | 0.0177 |
| 3T3 fibroblasts | CTGGGATCCA GCCTCCAACT (2) GTGACTGATG (2) GTGATAGATG (2)
| 21 | 0.021 |
| E15 cortex | CTGGGATCCA GATTCACCTG GGGATTGGGA
| 14.7 | 0.0147 |
| P1 cortex | CTGGGATCCA GTGACTGATG (2) GTGATAGATG (2)
| 13.5 | 0.0135 |
| Hypothalamus | CTGGGATCCA GCCTCCAACT (2) GTGACAGATG (2) GTGATAGATG (2)
| 10.8 | 0.0108 |
| E12.5 retina | CTGGGATCCA GATTCACCTG GTGACTGATG (2) GTGATAGATG (2)
| 15.1 | 0.0151 |
| E16.5 retina | CTGGGATCCA GATTCACCTG GCCTCCAACT (2) GTGACTGATG (2) GTGATAGATG (2)
| 10.8 | 0.0108 |
| E18.5 retina | GGGATTGGGA GTGATAGATG (2)
| 3.6 | 0.0036 |
| P0.5 retina | CTGGGATCCA GATTCACCTG GCCTCCAACT (2) GTGATAGATG (2)
| 9.9 | 0.0099 |
| P2.5 retina | CAGAGGGCAA CTGGGATCCA GCCTCCAACT (2) GCTCACTGAG (6) GGGATTGGGA GTGACAGATG (2) GTGATAGATG (2)
| 17.7 | 0.0177 |
| P4.5 retina | CTGGGATCCA GTGATAGATG (2)
| 13.9 | 0.0139 |
| P6.5 retina | CTGGGATCCA GCTCACTGAG (6) GTGACAGATG (2) GTGATAGATG (2)
| 16.7 | 0.0167 |
| P10.5 crx- retina | CAGAGGGCAA CTGGGATCCA GCCTCCAACT (2) GCTCACTGAG (6)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | CTGGGATCCA GATTCACCTG GCCTCCAACT (2) GCTCACTGAG (6) GTGATAGATG (2)
| 13.4 | 0.0134 |
| Adult retinal | CTGGGATCCA GATTCACCTG GTGATAGATG (2)
| 9.3 | 0.0093 |
| ONL | CAGAGGGCAA CTGGGATCCA GATTCACCTG GCCTCCAACT (2) GCTCACTGAG (6) GTGACAGATG (2)
| 22.9 | 0.0229 |