Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288098	Clk2	CDC-like kinase 2	3	3 F1	12748
Gene Ontology	ATP binding | autophosphorylation | kinase activity | nucleus | peptidyl-tyrosine phosphorylation | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	CLK2[CDC-like kinase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGCGGAAG CTTCATCTGA (2) TCAGGGGTTG TGGAGGTGGA (2) 8.1 0.0081 Cb medulloblastoma AAAGGAAAAA (2) 6.9 0.0069 P8 GC+1d culture ATGGAAAGGA CAAGCGGAAG TATATACTAC 6.8 0.0068 P8 GC+SHH+1d culture AAAGGAAAAA (2) ATGGAAAGGA CAAGCGGAAG CTTCATCTGA (2) TATATACTAC 14.1 0.0141 3T3 fibroblasts ATGGAAAGGA GCTGTGACCA 7 0.007 E15 cortex AAAGGAAAAA (2) CTTCATCTGA (2) 9.8 0.0098 P1 cortex CAAGCGGAAG CTTCAAAAAA (4) 13.6 0.0136 Hypothalamus AAAGGAAAAA (2) ATGGAAAGAA (2) GCTGTGACCA 12.7 0.0127 E12.5 retina CTTCATCTGA (2) 5.6 0.0056 E14.5 retina ATGGAAAGAA (2) CTTCAAAAAA (4) CTTCATCTGA (2) TGGAGGTGGA (2) 12.7 0.0127 E16.5 retina AAAGGAAAAA (2) ATGGAAAGGA CTTCAAAAAA (4) CTTCATCTGA (2) TATATACTAC 14.4 0.0144 E18.5 retina AAAGGAAAAA (2) CTTCAAAAAA (4) CTTCATCTGA (2) TGGAGGTGGA (2) 23.6 0.0236 P0.5 retina ATGGAAAGAA (2) CTTCAAAAAA (4) CTTCATCTGA (2) TATATACTAC TGGAGGTGGA (2) 17.8 0.0178 P2.5 retina CTTCAAAAAA (4) CTTCATCTGA (2) 15.9 0.0159 P4.5 retina AAAGGAAAAA (2) ATGGAAAGGA CTTCATCTGA (2) 17.9 0.0179 P6.5 retina ATGGAAAGAA (2) CTTCATCTGA (2) GCTGTGACCA 8.3 0.0083 P10.5 crx- retina CAAGCGGAAG CTTCATCTGA (2) GCTGTGACCA TATATACTAC 13.1 0.0131 P10.5 crx+ retina AAAGGAAAAA (2) CAAGCGGAAG CTTCATCTGA (2) GCTGTGACCA TCAGGGGTTG 15.3 0.0153 Adult retinal CTTCATCTGA (2) GCTGTGACCA TATATACTAC TCAGGGGTTG 14.9 0.0149 ONL CTTCAAAAAA (4) TATATACTAC TGGAGGTGGA (2) 5.7 0.0057