Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288460	D11Ertd72e	DNA segment, Chr 11, ERATO Doi 72, expressed	11	11 45.0 cM	52467
Mm.288460	MGC7717	hypothetical protein MGC7717	11		216951
Mm.288460	AI317223	expressed sequence AI317223	11		103677
Gene Ontology	chromosome | chromosome, telomeric region | DNA binding | nucleus | telomerase-dependent telomere maintenance
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTT (4) CCCACCAGCA (4) CCTACTTAAG (4) CCTTTAATTT (5) CTGGCAGGGG 9.7 0.0097 Cb medulloblastoma CCCACCAGCA (4) CTCCCATCCT (4) 4.6 0.0046 P8 GC+1d culture ATTTTTTTTT (4) CCTACTTAAG (4) CTCCCATCCT (4) GCTCTAGGAA GGGCCCTTTA (3) GTTTTGTTTC (3) 8.9 0.0089 P8 GC+SHH+1d culture ATTTTTTTTT (4) CCTACTTAAG (4) CTCCCATCCT (4) CTGGCAGGGG GTTTTGTTTC (3) 11.8 0.0118 3T3 fibroblasts CTCCCATCCT (4) CTGGCAGGGG 17.5 0.0175 E15 cortex AGATCCAAAA (2) CCTACTTAAG (4) 9.8 0.0098 P1 cortex ATTTTTTTTT (4) TGAAAATGTT 13.6 0.0136 Hypothalamus CTCCCATCCT (4) CTGGCAGGGG GGGCCCTTTA (3) TCTGACCTGA (2) TGAAAATGTT 10.8 0.0108 E12.5 retina AGATCCAAAA (2) CCTACTTAAG (4) GCTCTAGGAA GGGCCCTTTA (3) TCTGACCTGA (2) 13.2 0.0132 E14.5 retina ATTTTTTTTT (4) CCTACTTAAG (4) GGGCCCTTTA (3) GTTTTGTTTC (3) TCTGACCTGA (2) 9 0.009 E16.5 retina AGATCCAAAA (2) CCCACCAGCA (4) CCTACTTAAG (4) GATGGGCTTG (3) 7.2 0.0072 E18.5 retina AGATCCAAAA (2) ATTTTTTTTT (4) CCTACTTAAG (4) GATGGGCTTG (3) GGGCCCTTTA (3) TGAAAATGTT 10.8 0.0108 P0.5 retina AGATCCAAAA (2) ATTTTTTTTT (4) CCTACTTAAG (4) GTTTTGTTTC (3) TGAAAATGTT 15.8 0.0158 P2.5 retina AGATCCAAAA (2) ATTTTTTTTT (4) CCTACTTAAG (4) GATGGGCTTG (3) GGGCCCTTTA (3) TCTGACCTGA (2) TGAAAATGTT 17.8 0.0178 P4.5 retina ATTTTTTTTT (4) CCTACTTAAG (4) CTCCCATCCT (4) CTGGCAGGGG GCTCTAGGAA GTTTTGTTTC (3) TGAAAATGTT 27.8 0.0278 P6.5 retina AGATCCAAAA (2) GCTCTAGGAA GTTTTGTTTC (3) 5.1 0.0051 P10.5 crx- retina CCTACTTAAG (4) CCTTTAATTT (5) CTCCCATCCT (4) 7.5 0.0075 P10.5 crx+ retina CCTACTTAAG (4) CTCCCATCCT (4) CTGGCAGGGG GAGCATTCCT GTTTTGTTTC (3) 17.2 0.0172 Adult retinal CTCCCATCCT (4) CTGGCAGGGG GAGCATTCCT GGGCCCTTTA (3) GTTTTGTTTC (3) 16.8 0.0168 ONL CTGGCAGGGG GAGCATTCCT TCTGACCTGA (2) 7.6 0.0076