| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGTTAAGGA CTTAGCTGTT (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | CAAAGGAAAA GGTGGGTGGC (3) TAACTGACCC (2) TGATGAAAAA (2)
| 13.8 | 0.0138 |
| P8 GC+1d culture | CTTAGCTGTT (2) GTGGTGTATG TAACTGACCC (2) TGATAAAAAA TGCTTTCCTT (2)
| 5.5 | 0.0055 |
| P8 GC+SHH+1d culture | CAAAGGAAAA CCAAAAATGG (2) CCCCCGTACT CTTAGCTGTT (2) TAACTGACCC (2)
| 9.4 | 0.0094 |
| E15 cortex | CAAAGGAAAA CCAAAAATGG (2) CTTAGCTGTT (2)
| 14.7 | 0.0147 |
| P1 cortex | AGGTTAAGGA
| 4.5 | 0.0045 |
| Hypothalamus | GTGGTGTATG
| 1.8 | 0.0018 |
| E12.5 retina | CCAAAAATGG (2) CCCCCGTACT GCTTCTTCAA (3)
| 5.7 | 0.0057 |
| E14.5 retina | CTTAGCTGTT (2) TGATGAAAAA (2)
| 3.6 | 0.0036 |
| E16.5 retina | GTGGTGTATG TGCTTTCCTT (2)
| 3.6 | 0.0036 |
| E18.5 retina | TGATAAAAAA TGCTTTCCTT (2)
| 3.6 | 0.0036 |
| P0.5 retina | CTTAGCTGTT (2) GCTTCTTCAA (3)
| 4 | 0.004 |
| P2.5 retina | CCAAAAATGG (2) CTTAGCTGTT (2) TAACTGACCC (2)
| 7.1 | 0.0071 |
| P4.5 retina | TGATAAAAAA
| 4 | 0.004 |
| P6.5 retina | AGGTTAAGGA CCAAAAATGG (2) GGTGGGTGGC (3) GTGGTGTATG
| 11.6 | 0.0116 |
| P10.5 crx- retina | CCAAAAATGG (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AGGTTAAGGA GTGGTGTATG TGATAAAAAA
| 5.7 | 0.0057 |
| Adult retinal | CCAAAAATGG (2) CCCCCGTACT CTTAGCTGTT (2) GCTTCTTCAA (3) TGATGAAAAA (2)
| 15 | 0.015 |
| ONL | AGGTTAAGGA CCAAAAATGG (2) CTTAGCTGTT (2) GGTGGGTGGC (3) GTGGTGTATG TGATGAAAAA (2)
| 13.3 | 0.0133 |