Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.288510
Brp44l
brain protein 44-like
17
17 A1 (17 7.8 cM)
55951
Mm.288510
4930506C21Rik
RIKEN cDNA 4930506C21 gene
17
75060
Mm.288510
A630084N20Rik
RIKEN cDNA A630084N20 gene
17
320254
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTGATCC
(
4
)
3.3
0.0033
Cb medulloblastoma
CCTTTGATCC
(
4
)
2.3
0.0023
P8 GC+1d culture
CCTTTGATCC
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTGATCC
(
4
)
1.2
0.0012
E15 cortex
CAGTTGCTGG (
3
)
4.9
0.0049
P1 cortex
CCTTTGATCC
(
4
)
13.6
0.0136
Hypothalamus
CAGTTGCTGG (
3
)
1.8
0.0018
E12.5 retina
CCTTTGATCC
(
4
)
5.6
0.0056
E14.5 retina
CCTTTGATCC
(
4
)
1.8
0.0018
E16.5 retina
CAGTTGCTGG (
3
)
CCTTTGATCC
(
4
)
5.4
0.0054
E18.5 retina
CCTTTGATCC
(
4
)
1.8
0.0018
P0.5 retina
CCTTTGATCC
(
4
)
2
0.002
P2.5 retina
CCTTTGATCC
(
4
)
7
0.007
P4.5 retina
CCTTTGATCC
(
4
)
5.9
0.0059
P6.5 retina
CAGTTGCTGG (
3
)
CCTTTGATCC
(
4
)
5
0.005
P10.5 crx- retina
CAGTTGCTGG (
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTGATCC
(
4
)
5.8
0.0058
ONL
CCTTTGATCC
(
4
)
5.7
0.0057
