Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288641	BB235941	expressed sequence BB235941	8		102367
Mm.288641	Cog8	component of oligomeric golgi complex 8	8		97484
Mm.288641	2610019N19Rik	RIKEN cDNA 2610019N19 gene	8		68023
Human Homolog	PDF[peptide deformylase-like protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATACCTTT (2) GAGAGGAGTG (5) GAGCCTGTAA (4) TTGCTGCTGG 13.1 0.0131 Cb medulloblastoma AGGCAGGGGT CAGACTAAGA (3) GAGCCTGTAA (4) TTGCTGCTGG 13.8 0.0138 P8 GC+1d culture CAGACTAAGA (3) GAGCCTGTAA (4) 10.3 0.0103 P8 GC+SHH+1d culture AGGCAGGGGT GAGAGGAGTG (5) GAGCCTGTAA (4) GAGGGGGAGC (3) TTGCTGCTGG 26.8 0.0268 3T3 fibroblasts AGGCAGGGGT GAGCCTGTAA (4) TTGCTGCTGG 28 0.028 E15 cortex CAGACTAAGA (3) GAGCCTGTAA (4) TTGCTGCTGG 19.7 0.0197 P1 cortex AAATACCTTT (2) GAGAGGAGTG (5) GAGCCTGTAA (4) TTGCTGCTGG 27.1 0.0271 Hypothalamus AGGCAGGGGT GAGAGGAGTG (5) GAGGGGGAGC (3) TTGCTGCTGG 14.5 0.0145 E12.5 retina CAGCTGATGC (3) GAGAGGAGTG (5) 7.5 0.0075 E14.5 retina AGGCAGGGGT CTCCGCTGCT (3) 3.6 0.0036 E16.5 retina AAATACCTTT (2) GAGAGGAGTG (5) TTGCTGCTGG 14.5 0.0145 E18.5 retina CTCCGCTGCT (3) GAGAGGAGTG (5) GAGCCTGTAA (4) TTGCTGCTGG 12.6 0.0126 P0.5 retina CTCCGCTGCT (3) GAGAGGAGTG (5) GAGCCTGTAA (4) TTGCTGCTGG 9.9 0.0099 P2.5 retina GAGCCTGTAA (4) GAGGGGGAGC (3) 8.8 0.0088 P4.5 retina AGGCAGGGGT GAGAGGAGTG (5) GAGCCTGTAA (4) TTGCTGCTGG 21.8 0.0218 P6.5 retina AAATACCTTT (2) AGGCAGGGGT CTCCGCTGCT (3) GAGAGGAGTG (5) GAGCCTGTAA (4) GAGGGGGAGC (3) TTGCTGCTGG 25.2 0.0252 P10.5 crx- retina CTCCGCTGCT (3) GAGAGGAGTG (5) GAGCCTGTAA (4) 13 0.013 P10.5 crx+ retina AAATACCTTT (2) GAGCCTGTAA (4) TTGCTGCTGG 11.5 0.0115 Adult retinal CAGCTGATGC (3) GAGAGGAGTG (5) GAGCCTGTAA (4) TTGCTGCTGG 7.6 0.0076 ONL AAATACCTTT (2) CAGACTAAGA (3) GAGCCTGTAA (4) 11.4 0.0114