Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.288698
2610011I18Rik
RIKEN cDNA 2610011I18 gene
10
70295
Mm.288698
Srgap1
SLIT-ROBO Rho GTPase activating protein 1
10
117600
Mm.288698
C030027H14Rik
RIKEN cDNA C030027H14 gene
10
77465
Mm.288698
4930402N20Rik
RIKEN cDNA 4930402N20 gene
10
73819
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTTCTGTTC
(
5
)
GGTGATGAGG
TGGGACGCCA
(
4
)
6.5
0.0065
Cb medulloblastoma
GGTGATGAGG
TACCATTACA
(
4
)
6.9
0.0069
P8 GC+1d culture
GGTGATGAGG
TACCATTACA
(
4
)
TGGGACGCCA
(
4
)
7.9
0.0079
P8 GC+SHH+1d culture
GGTGATGAGG
TACCATTACA
(
4
)
10.6
0.0106
3T3 fibroblasts
GGTGATGAGG
21
0.021
E15 cortex
GGTGATGAGG
TGGGACGCCA
(
4
)
14.8
0.0148
P1 cortex
CTCAGGAACA
GGTGATGAGG
TACCATTACA
(
4
)
TGGGACGCCA
(
4
)
31.7
0.0317
Hypothalamus
GGTGATGAGG
TACCATTACA
(
4
)
9
0.009
E12.5 retina
GGTGATGAGG
TACCATTACA
(
4
)
7.5
0.0075
E14.5 retina
GGTGATGAGG
1.8
0.0018
E16.5 retina
ACTTCTGTTC
(
5
)
CTCAGGAACA
GGTGATGAGG
TACCATTACA
(
4
)
9
0.009
E18.5 retina
GGTGATGAGG
1.8
0.0018
P0.5 retina
GGTGATGAGG
7.9
0.0079
P2.5 retina
CTCAGGAACA
GGTGATGAGG
5.3
0.0053
P4.5 retina
CTCAGGAACA
GGTGATGAGG
TACCATTACA
(
4
)
TGGGACGCCA
(
4
)
10
0.01
P6.5 retina
GGTGATGAGG
TACCATTACA
(
4
)
6.7
0.0067
P10.5 crx- retina
GGTGATGAGG
TACCATTACA
(
4
)
14.8
0.0148
P10.5 crx+ retina
GGTGATGAGG
3.8
0.0038
Adult retinal
GGTGATGAGG
TGGGACGCCA
(
4
)
20.4
0.0204
ONL
GGTGATGAGG
3.8
0.0038
