| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCGAGCACAA GCCTATCCAA (2) GCTATTAAAC (3) TGAACCAAGA
| 22.8 | 0.0228 |
| Cb medulloblastoma | AGCAGCTGCT (2) GCCTATCCAA (2)
| 48.5 | 0.0485 |
| P8 GC+1d culture | ACCGTGTGCC AGCAGCTGCT (2) CCGAGCACAA GCCTATCCAA (2)
| 32 | 0.032 |
| P8 GC+SHH+1d culture | ACCGTGTGCC ACTTCCGGAA CCGAGCACAA GCCTATCCAA (2) GCTATTAAAC (3)
| 21.2 | 0.0212 |
| 3T3 fibroblasts | GCCTATCCAA (2)
| 3.5 | 0.0035 |
| E15 cortex | ACCGTGTGCC
| 4.9 | 0.0049 |
| P1 cortex | GCCTATCCAA (2) GCTATTAAAC (3)
| 22.7 | 0.0227 |
| Hypothalamus | GCCTATCCAA (2) GCTATTAAAC (3)
| 34.4 | 0.0344 |
| E12.5 retina | AAGCCAGCTG ACCGTGTGCC AGCAGCTGCT (2) GCCTATCCAA (2) GCTATTAAAC (3)
| 20.7 | 0.0207 |
| E14.5 retina | ACCGTGTGCC ACTTCCGGAA GCCTATCCAA (2) GCTATTAAAC (3)
| 23.6 | 0.0236 |
| E16.5 retina | AAGCCAGCTG ACCGTGTGCC GCCTATCCAA (2) GCTATTAAAC (3)
| 39.8 | 0.0398 |
| E18.5 retina | ACCGTGTGCC GCCTATCCAA (2) GCTATTAAAC (3)
| 18.1 | 0.0181 |
| P0.5 retina | AAGCCAGCTG AGCAGCTGCT (2) GCCTATCCAA (2)
| 25.6 | 0.0256 |
| P2.5 retina | ACCGTGTGCC ACTTCCGGAA GCCTATCCAA (2)
| 21.2 | 0.0212 |
| P4.5 retina | GCCTATCCAA (2) GCTATTAAAC (3)
| 11.9 | 0.0119 |
| P6.5 retina | ACCGTGTGCC GCCTATCCAA (2) GCTATTAAAC (3) TGAACCAAGA
| 16.7 | 0.0167 |
| P10.5 crx- retina | ACCGTGTGCC ACTTCCGGAA GCCTATCCAA (2)
| 42.7 | 0.0427 |
| P10.5 crx+ retina | ACCGTGTGCC GCCTATCCAA (2) GCTATTAAAC (3)
| 36.5 | 0.0365 |
| Adult retinal | GCCTATCCAA (2)
| 13 | 0.013 |
| ONL | GCCTATCCAA (2) GCTATTAAAC (3) TGAACCAAGA
| 5.7 | 0.0057 |