| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAGAAGG (4) GGCTGGAAGA (4) TTTTTTTTTT (2)
| 9.8 | 0.0098 |
| Cb medulloblastoma | CAAAAGAAGG (4) TTTTTTTTTT (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GGCTGGAAGA (4) GTAGATGTAC (3) GTTTGTTTTG TGGAAATGTT (5) TTTTTTTTTT (2)
| 20.4 | 0.0204 |
| P8 GC+SHH+1d culture | CAAAAGAAGG (4) GTAGATGTAC (3) TGGAAATGTT (5) TTTTTTTTTT (2)
| 13 | 0.013 |
| E15 cortex | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | GTAGATGTAC (3) TGGAAATGTT (5) TTTTTTTTTT (2)
| 13.5 | 0.0135 |
| Hypothalamus | CAAAAGAAGG (4) TTTTTTTTTT (2)
| 9 | 0.009 |
| E12.5 retina | GAATTTGGCT (2) GTAGATGTAC (3) GTTTGTTTTG TTTTTTTTTT (2)
| 18.8 | 0.0188 |
| E14.5 retina | CAAAAGAAGG (4) GTAGATGTAC (3) TTTTTTTTTT (2)
| 27.3 | 0.0273 |
| E16.5 retina | GTAGATGTAC (3) GTTTGTTTTG TTTTTTTTTT (2)
| 10.8 | 0.0108 |
| E18.5 retina | CAAAAGAAGG (4) GGCTGGAAGA (4) TTTTTTTTTT (2)
| 14.5 | 0.0145 |
| P0.5 retina | GTAGATGTAC (3) GTTTGTTTTG TGGAAATGTT (5) TTTTTTTTTT (2)
| 21.5 | 0.0215 |
| P2.5 retina | GAATTTGGCT (2) GTAGATGTAC (3) TGGAAATGTT (5) TTTTTTTTTT (2)
| 14.1 | 0.0141 |
| P4.5 retina | CAAAAGAAGG (4) TTTTTTTTTT (2)
| 11.9 | 0.0119 |
| P6.5 retina | CAAAAGAAGG (4) GGCTGGAAGA (4) TTTTTTTTTT (2)
| 11.7 | 0.0117 |
| P10.5 crx- retina | CAAAAGAAGG (4) GTTTGTTTTG TGGAAATGTT (5)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | TGGAAATGTT (5) TTTTTTTTTT (2)
| 5.7 | 0.0057 |
| Adult retinal | CAAAAGAAGG (4) GGCTGGAAGA (4) TTTTTTTTTT (2)
| 11.2 | 0.0112 |
| ONL | CAAAAGAAGG (4) TTTTTTTTTT (2)
| 5.7 | 0.0057 |