| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTCCGTTCTC TTTACTGTGT
| 29.4 | 0.0294 |
| Cb medulloblastoma | GTCCGTTCTC TTTACTGTGT
| 4.6 | 0.0046 |
| P8 GC+1d culture | CTGTCTTCTG (2) TCTACCGTGT TTTACTGTGT
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | CTGTCTTCTG (2) GTCCGTTCTC TTTACTGTGT
| 16.3 | 0.0163 |
| 3T3 fibroblasts | GTCCGTTCTC TTTACTGTGT
| 7 | 0.007 |
| E15 cortex | GTCCGTTCTC TTTACTGTGT
| 19.7 | 0.0197 |
| P1 cortex | GTCCGTTCTC TTTACTGTGT
| 18.1 | 0.0181 |
| Hypothalamus | CTGTCTTCTG (2) GAATTTAAAA TTTACTGTGT
| 27.1 | 0.0271 |
| E12.5 retina | CTGTCTTCTG (2) TCTACCGTGT TTTACTGTGT
| 26.3 | 0.0263 |
| E14.5 retina | TTTACTGTGT
| 16.4 | 0.0164 |
| E16.5 retina | CTGTCTTCTG (2) GTCCGTTCTC TTTACTGTGT
| 19.9 | 0.0199 |
| E18.5 retina | CTGTCTTCTG (2) GAATTTAAAA GGGAAAGGAA TTTACTGTGT
| 21.8 | 0.0218 |
| P0.5 retina | CTGTCTTCTG (2) GTCCGTTCTC TCTACCGTGT
| 9.9 | 0.0099 |
| P2.5 retina | GGGAAAGGAA GTCCGTTCTC GTGGTTGAGG (4) TTTACTGTGT
| 15.9 | 0.0159 |
| P4.5 retina | GAATTTAAAA TTTACTGTGT
| 9.9 | 0.0099 |
| P6.5 retina | GAATTTAAAA GTCCGTTCTC TTTACTGTGT
| 8.4 | 0.0084 |
| P10.5 crx- retina | CTGTCTTCTG (2) GAATTTAAAA
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GTCCGTTCTC GTGGTTGAGG (4) TTTACTGTGT
| 15.3 | 0.0153 |
| Adult retinal | CTGTCTTCTG (2) GGGAAAGGAA GTCCGTTCTC GTGGTTGAGG (4) TCTACCGTGT TTTACTGTGT
| 18.8 | 0.0188 |
| ONL | TTTACTGTGT
| 11.5 | 0.0115 |