| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 234.9 | 0.2349 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT
| 864.9 | 0.8649 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 227 | 0.227 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 312.7 | 0.3127 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AGAAAAAAAA (2) GGAGCAGAGG (2) TGTCTGCTCT
| 49 | 0.049 |
| E15 cortex | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 247.3 | 0.2473 |
| P1 cortex | AAAAAAAAAA (2) AGAAAAAAAA (2)
| 254.5 | 0.2545 |
| Hypothalamus | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 164.8 | 0.1648 |
| E12.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 167.2 | 0.1672 |
| E14.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2)
| 123.8 | 0.1238 |
| E16.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2) TGTCTGCTCT
| 65.2 | 0.0652 |
| E18.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT TGTCTGCTCT
| 414.7 | 0.4147 |
| P0.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2)
| 149.1 | 0.1491 |
| P2.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) GGAGCAGAGG (2) TGTCTGCTCT
| 360.7 | 0.3607 |
| P4.5 retina | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2)
| 325 | 0.325 |
| P6.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2)
| 286.7 | 0.2867 |
| P10.5 crx- retina | AAAAAAAAAA (2) AGAAAAAAAA (2) GGAGCAGAGG (2)
| 53.9 | 0.0539 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2)
| 105.7 | 0.1057 |
| Adult retinal | AAAAAAAAAA (2) AGAAAAAAAA (2) CTCGCTGTCT GGAGCAGAGG (2)
| 77.9 | 0.0779 |
| ONL | AAAAAAAAAA (2) AAAAAGAAAA AGAAAAAAAA (2) GGAGCAGAGG (2)
| 128.3 | 0.1283 |