| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGCAAAGA (2) ACAGTACAAC ACATTGAAAA CAGCTCACTG (2) CTGGAAAGCT (2) TTTTTTTTTT (2)
| 52.3 | 0.0523 |
| Cb medulloblastoma | AAGGCAAAGA (2) AAGGCAAGAA (2) ACAGTACAAC ACATTGAAAA TTTTTTTTTT (2)
| 53.1 | 0.0531 |
| P8 GC+1d culture | AAGGCAAAGA (2) AAGGCAAGAA (2) ACAGTACAAC ACATTGAAAA TTTTTTTTTT (2)
| 31.9 | 0.0319 |
| P8 GC+SHH+1d culture | AAGGCAAAGA (2) ACAGTACAAC ACATTGAAAA ACCTTGAAAC (2) CAGCTCACTG (2) TTTTTTTTTT (2)
| 42.2 | 0.0422 |
| 3T3 fibroblasts | AAGGCAAAGA (2) ACCTTGAAAC (2) CAGCTCACTG (2)
| 38.5 | 0.0385 |
| E15 cortex | AAGGCAAAGA (2) ACATTGAAAA CAGCTCACTG (2) CTGGAAAGCT (2) TTTTTTTTTT (2)
| 44.3 | 0.0443 |
| P1 cortex | AAGGCAAAGA (2) TTTTTTTTTT (2)
| 40.9 | 0.0409 |
| Hypothalamus | AAGGCAAAGA (2) ACATTGAAAA ACCTTGAAAC (2) CAGCTCACTG (2) TTTTTTTTTT (2)
| 41.6 | 0.0416 |
| E12.5 retina | AACTTGAAAA (3) AAGGCAAAGA (2) ACATTGAAAA ACCTTGAAAC (2) CTGGAAAGCT (2) TTTTTTTTTT (2)
| 63.9 | 0.0639 |
| E14.5 retina | AACTTGAAAA (3) AAGGCAAAGA (2) AAGGCAAGAA (2) ACAGTACAAC ACATTGAAAA ACCTTGAAAC (2) TTTTTTTTTT (2)
| 80.1 | 0.0801 |
| E16.5 retina | AAGGCAAAGA (2) AAGGCAAGAA (2) ACAGTACAAC ACATTGAAAA ACCTTGAAAC (2) CAGCTCACTG (2) CTGGAAAGCT (2) TTTTTTTTTT (2)
| 59.7 | 0.0597 |
| E18.5 retina | AACTTGAAAA (3) AAGGCAAAGA (2) ACAGTACAAC ACATTGAAAA ACCTTGAAAC (2) CAGCTCACTG (2) TTTTTTTTTT (2)
| 52.7 | 0.0527 |
| P0.5 retina | AAGGCAAAGA (2) AAGGCAAGAA (2) ACATTGAAAA ACCTTGAAAC (2) TTTTTTTTTT (2)
| 58.9 | 0.0589 |
| P2.5 retina | AAGGCAAAGA (2) ACATTGAAAA TTTTTTTTTT (2)
| 24.6 | 0.0246 |
| P4.5 retina | AAGGCAAAGA (2) ACATTGAAAA AGGCAAGAAA TTTTTTTTTT (2)
| 29.7 | 0.0297 |
| P6.5 retina | AAGGCAAAGA (2) ACAGTACAAC ACATTGAAAA CAGCTCACTG (2) TTTTTTTTTT (2)
| 26.7 | 0.0267 |
| P10.5 crx- retina | AAGGCAAAGA (2) ACAGTACAAC ACATTGAAAA AGGCAAGAAA
| 39.1 | 0.0391 |
| P10.5 crx+ retina | AAGGCAAAGA (2) ACATTGAAAA AGGCAAGAAA CTGGAAAGCT (2) TTTTTTTTTT (2)
| 19.1 | 0.0191 |
| Adult retinal | AACTTGAAAA (3) AAGGCAAAGA (2) CAGCTCACTG (2) TTTTTTTTTT (2)
| 24.2 | 0.0242 |
| ONL | AAGGCAAAGA (2) TTTTTTTTTT (2)
| 38.3 | 0.0383 |