Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28995	Jarid1b	jumonji, AT rich interactive domain 1B (Rbp2 like)	1	1 72.0 cM	75605
Human Homolog	JARID1B[Jumonji, AT rich interactive domain 1B (RBP2-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGTGATGG (3) TAATTCAGGA 4.9 0.0049 Cb medulloblastoma ATCAGTGTGA GAAGCAGTGT (2) TAATTCAGGA 13.8 0.0138 P8 GC+1d culture ATCAGTGTGA CCAGTGATGG (3) GAAGCAGTGT (2) TAATTCAGGA TACAGAAAGC TTCTTTTTCA (3) 11.2 0.0112 P8 GC+SHH+1d culture ATCAGTGTGA CCAGTGATGG (3) TAATTCAGGA TTCTTTTTCA (3) 11.7 0.0117 3T3 fibroblasts TTCTTTTTCA (3) 3.5 0.0035 E15 cortex AGAGCAGAGG (2) CGGACCCCCC TAATTCAGGA TACAGAAAGC 24.6 0.0246 P1 cortex GGATATTTTT TAATTCAGGA TACAGAAAGC TTCTTTTTCA (3) 22.6 0.0226 Hypothalamus AGAGCAGAGG (2) ATCAGTGTGA CCAGTGATGG (3) GAAGCAGTGT (2) 9 0.009 E12.5 retina TAATTCAGGA TACAGAAAGC 5.7 0.0057 E14.5 retina ATCAGTGTGA CCAGTGATGG (3) GCCAGTTCCA 10.9 0.0109 E16.5 retina ATCAGTGTGA CCCCACTAAT TAATTCAGGA 12.6 0.0126 E18.5 retina ATCAGTGTGA CCAGTGATGG (3) GAAGCAGTGT (2) 7.2 0.0072 P0.5 retina ATCAGTGTGA CCAGTGATGG (3) 11.8 0.0118 P2.5 retina ATCAGTGTGA TAATTCAGGA TACAGAAAGC 14 0.014 P4.5 retina ATCAGTGTGA CCAGTGATGG (3) CCCCACTAAT TAATTCAGGA 13.9 0.0139 P6.5 retina ATCAGTGTGA CCAGTGATGG (3) CCCCACTAAT TACAGAAAGC 11.7 0.0117 P10.5 crx- retina GAAGCAGTGT (2) TAATTCAGGA 3.8 0.0038 P10.5 crx+ retina AAGTGCCTGT (2) AGAGCAGAGG (2) ATCAGTGTGA TACAGAAAGC 13.3 0.0133 Adult retinal AAGTGCCTGT (2) GCCAGTTCCA GGATATTTTT TTCTTTTTCA (3) 9.4 0.0094 ONL CCCCACTAAT CGGACCCCCC GAAGCAGTGT (2) GCCAGTTCCA GGATATTTTT TAATTCAGGA TACAGAAAGC 13.3 0.0133