Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290027	Ncbp2	nuclear cap binding protein subunit 2	16		68092
Gene Ontology	mRNA processing | mRNA-nucleus export | nucleic acid binding | nucleus | RNA binding | snRNA-nucleus export | transport
Human Homolog	NCBP2[nuclear cap binding protein subunit 2, 20kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGACTGAGG (2) GTTGGGTCAC TAAAATTAGT (3) TCGGGTGGGT TTTCCCAAAA TTTTTTTAAG (3) 12.9 0.0129 Cb medulloblastoma GGGCGTTTTG TCGGGTGGGT TTTCCCAAAA 6.9 0.0069 P8 GC+1d culture GACCTCAGTA GGGCGTTTTG GTTGGGTCAC TAAAATTAGT (3) TAATTACAAA (5) TATTAATAAG TCGGGTGGGT TGGGTACTGT TTTCCCAAAA 29.5 0.0295 P8 GC+SHH+1d culture CTTTAGTGAC GACCTCAGTA TCGGGTGGGT TGGGTACTGT TTTCCCAAAA TTTTTTTAAG (3) 14.1 0.0141 3T3 fibroblasts GTTGGGTCAC 3.5 0.0035 E15 cortex GACCTCAGCA (2) GGGCGTTTTG TCGGGTGGGT 19.7 0.0197 P1 cortex GACCTCAGTA 4.5 0.0045 Hypothalamus CTTTAGTGAC GACCTCAGCA (2) GGGACTGAGG (2) TAAAATTAGT (3) TATTAATAAG 10.8 0.0108 E12.5 retina GACCTCAGTA TAAAATTAGT (3) TATTAATAAG TCGGGTGGGT TGGGTACTGT TTTCCCAAAA 15.2 0.0152 E14.5 retina CTTTAGTGAC TAAAATTAGT (3) TAATTACAAA (5) TATTAATAAG TCGGGTGGGT TTTCCCAAAA 19.9 0.0199 E16.5 retina CTTTAGTGAC GACCTCAGTA TAATTACAAA (5) TATTAATAAG TCGGGTGGGT TGGGTTCCTG TTTCCCAAAA 27 0.027 E18.5 retina CTTTAGTGAC GACCTCAGTA TAATTACAAA (5) TATTAATAAG TCGGGTGGGT 16.3 0.0163 P0.5 retina CTTTAGTGAC GGGACTGAGG (2) GTTGGGTCAC TAAAATTAGT (3) TATTAATAAG TCGGGTGGGT 15.8 0.0158 P2.5 retina GACCTCAGTA TAAAATTAGT (3) TAATTACAAA (5) TATTAATAAG TTTCCCAAAA 12.5 0.0125 P4.5 retina CTTTAGTGAC GACCTCAGTA TAAAATTAGT (3) TAATTACAAA (5) TTTCCCAAAA 15.9 0.0159 P6.5 retina GACCTCAGTA GGGCGTTTTG TAAAATTAGT (3) TATTAATAAG TCGGGTGGGT TTTCCCAAAA 16.7 0.0167 P10.5 crx- retina TAAAATTAGT (3) TATTAATAAG TTTCCCAAAA 7.5 0.0075 P10.5 crx+ retina TAAAATTAGT (3) TCGGGTGGGT TGGGTTCCTG 5.7 0.0057 Adult retinal TAAAATTAGT (3) TAATTACAAA (5) TCGGGTGGGT 5.7 0.0057 ONL TCGGGTGGGT TGGGTTCCTG TTTCCCAAAA TTTTTTTAAG (3) 11.4 0.0114