Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290083	Scn3b	sodium channel, voltage-gated, type III, beta	9		235281
Gene Ontology	integral to membrane | ion channel activity | ion transport | sodium ion transport | voltage-gated ion channel activity | voltage-gated sodium channel activity
Human Homolog	SCN3B[sodium channel, voltage-gated, type III, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 14.7 0.0147 Cb medulloblastoma AGAGCAGGGA TCAATAAAGC (3) 13.9 0.0139 P8 GC+1d culture ACACAATAAA (2) AGAGCAGGGA GGAGCCCGGG (2) TCAATAAAGC (3) 22.7 0.0227 P8 GC+SHH+1d culture ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 18.7 0.0187 3T3 fibroblasts AGAGCAGGGA TGCTGGCCTA 7 0.007 E15 cortex TCAATAAAGC (3) 9.9 0.0099 P1 cortex ACACAATAAA (2) TCAATAAAGC (3) 54.6 0.0546 Hypothalamus ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 34.4 0.0344 E12.5 retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 18.8 0.0188 E14.5 retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 18.2 0.0182 E16.5 retina ACACAATAAA (2) TCAATAAAGC (3) 39.8 0.0398 E18.5 retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 40 0.04 P0.5 retina ACACAATAAA (2) AGAGCAGGGA GGAGCCCGGG (2) TCAATAAAGC (3) TGCTGGCCTA 29.6 0.0296 P2.5 retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) TGCTGGCCTA 47.6 0.0476 P4.5 retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 29.8 0.0298 P6.5 retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 41.7 0.0417 P10.5 crx- retina ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 37.2 0.0372 P10.5 crx+ retina ACACAATAAA (2) GGAGCCCGGG (2) TCAATAAAGC (3) 36.5 0.0365 Adult retinal ACACAATAAA (2) TCAATAAAGC (3) 26 0.026 ONL ACACAATAAA (2) AGAGCAGGGA TCAATAAAGC (3) 19.1 0.0191