| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAATGTAAA GAACAGGATA TTCAGAGACC (4)
| 6.5 | 0.0065 |
| P8 GC+1d culture | CTCTCCTTGG (4) GAAATGTAAA GAACAGGATA TCACCTCAAA (2) TTATCAGGTG TTCAGAGACC (4)
| 10.1 | 0.0101 |
| P8 GC+SHH+1d culture | ATCCTGTCTG (4) GAAATGTAAA GAACAGGATA TTCAGAGACC (4)
| 5.9 | 0.0059 |
| 3T3 fibroblasts | TTCAGAGACC (4)
| 7 | 0.007 |
| P1 cortex | TTCAGAGACC (4)
| 9.1 | 0.0091 |
| Hypothalamus | CTCTCCTTGG (4) TTATCAGGTG
| 3.6 | 0.0036 |
| E12.5 retina | ATCCTGTCTG (4) TTCAGAGACC (4)
| 9.4 | 0.0094 |
| E14.5 retina | GAAATGTAAA GAACAGGATA TTATCAGGTG
| 5.4 | 0.0054 |
| E16.5 retina | GAAATGTAAA TTCAGAGACC (4)
| 3.6 | 0.0036 |
| E18.5 retina | GAAATGTAAA TCACCTCAAA (2)
| 3.6 | 0.0036 |
| P0.5 retina | CTCTCCTTGG (4) GAACAGGATA TCACCTCAAA (2) TTCAGAGACC (4)
| 11.9 | 0.0119 |
| P2.5 retina | TTCAGAGACC (4)
| 1.8 | 0.0018 |
| P4.5 retina | GAAATGTAAA TTCAGAGACC (4)
| 4 | 0.004 |
| P6.5 retina | CTCTCCTTGG (4) TCACCTCAAA (2) TTCAGAGACC (4)
| 6.7 | 0.0067 |
| P10.5 crx- retina | ATCCTGTCTG (4) CTCTCCTTGG (4) GAACAGGATA TTCAGAGACC (4)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | ATCCTGTCTG (4) GAACAGGATA
| 5.7 | 0.0057 |
| Adult retinal | GAACAGGATA TTATCAGGTG
| 3.8 | 0.0038 |
| ONL | GAACAGGATA
| 1.9 | 0.0019 |