Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2902	Ptprn	protein tyrosine phosphatase, receptor type, N	1	1 41.0 cM	19275
Gene Ontology	extracellular space | hydrolase activity | integral to membrane | membrane fraction | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRN[protein tyrosine phosphatase, receptor type, N]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAAGCCAG (2) GCCAAGTAAG GGCAAAGGAG (3) 9.7 0.0097 Cb medulloblastoma AGGGAGGAGT (2) 2.3 0.0023 P8 GC+1d culture GCCAAGTAAG GCCACAAAGT GGAAGCAGAC 5.7 0.0057 P8 GC+SHH+1d culture GCCAAGCCAG (2) GCCAAGTAAG GGCAAAGGAG (3) 3.6 0.0036 3T3 fibroblasts AGGGAGGAGT (2) GCCAAGCCAG (2) GCCAAGTAAG 24.5 0.0245 E15 cortex AGGGAGGAGT (2) GCCAAGCCAG (2) GCCAAGTAAG 24.7 0.0247 P1 cortex GCCAAGTAAG 13.6 0.0136 Hypothalamus GCCAAGTAAG GGAAGCAGAC 10.8 0.0108 E12.5 retina GCCAAGTAAG 3.8 0.0038 E14.5 retina GCCAAGCCAG (2) GCCAAGTAAG GGAAGCAGAC GGCAAAGGAG (3) 10.9 0.0109 E16.5 retina GCCAAGCCAG (2) GGAAGCAGAC GGCAAAGGAG (3) 9 0.009 E18.5 retina GCCAAGTAAG GCCACAAAGT 3.6 0.0036 P0.5 retina GCCAAGCCAG (2) GCCAAGTAAG 5.9 0.0059 P2.5 retina GGAAGCAGAC GGCAAAGGAG (3) 3.6 0.0036 P4.5 retina GCCACAAAGT 2 0.002 P6.5 retina GCCAAGCCAG (2) GCCAAGTAAG 8.4 0.0084 P10.5 crx- retina GCCAAGCCAG (2) GCCAAGTAAG GGAAGCAGAC 7.5 0.0075 P10.5 crx+ retina GCCAAGTAAG 1.9 0.0019 Adult retinal GCCAAGTAAG GGAAGCAGAC 5.6 0.0056 ONL GCCAAGTAAG GGAAGCAGAC 9.6 0.0096