| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCCCAGTCT TCTGTTACTA (3) TGGTTGCTGG
| 73.4 | 0.0734 |
| Cb medulloblastoma | CCCCCAGTCT TGGTTGCTGG
| 117.9 | 0.1179 |
| P8 GC+1d culture | CAGAGAGAGG TCTCCTTATC TCTGTTACTA (3) TGGTTGCTGG TTCTCCTTCT
| 63.8 | 0.0638 |
| P8 GC+SHH+1d culture | CAGAGAGAGG CCCCCAGTCT TCTCCTTATC TGGTTGCTGG
| 94.8 | 0.0948 |
| 3T3 fibroblasts | CCCCCAGTCT TGGTTGCTGG
| 224.3 | 0.2243 |
| E15 cortex | TCCTTGGATG TGGTTGCTGG
| 287 | 0.287 |
| P1 cortex | CCCCCAGTCT TCCTTGGATG TCTGTTACTA (3) TGGTTGCTGG
| 99.9 | 0.0999 |
| Hypothalamus | CAGAGAGAGG TGCTTGCTGG (3) TGGTTGCTGG
| 353.2 | 0.3532 |
| E12.5 retina | CCCCCAGTCT TCTCCTTATC TCTGTTACTA (3) TGGTTGCTGG
| 165.3 | 0.1653 |
| E14.5 retina | TCTGTTACTA (3) TGCTTGCTGG (3) TGGTTGCTGG
| 943.8 | 0.9438 |
| E16.5 retina | TGCTTGCTGG (3) TGGTTGCTGG
| 773.3 | 0.7733 |
| E18.5 retina | TGCTTGCTGG (3) TGGTTGCTGG
| 254.6 | 0.2546 |
| P0.5 retina | CCCCCAGTCT TGGTTGCTGG
| 194.3 | 0.1943 |
| P2.5 retina | CAGAGAGAGG TCTCCTTATC TGCTTGCTGG (3) TGGTTGCTGG TTCTCCTTCT
| 174.3 | 0.1743 |
| P4.5 retina | CCCCCAGTCT TGGTTGCTGG
| 152.6 | 0.1526 |
| P6.5 retina | CCCCCAGTCT TCTCCTTATC TCTGTTACTA (3) TGGTTGCTGG
| 165.1 | 0.1651 |
| P10.5 crx- retina | TGCTTGCTGG (3) TGGTTGCTGG
| 282.4 | 0.2824 |
| P10.5 crx+ retina | CAGAGAGAGG TCTGTTACTA (3) TGCTTGCTGG (3) TGGTTGCTGG
| 107.6 | 0.1076 |
| Adult retinal | TCTCCTTATC TCTGTTACTA (3) TGGTTGCTGG TTCTCCTTCT
| 220.5 | 0.2205 |
| ONL | TGCTTGCTGG (3) TGGTTGCTGG
| 404.1 | 0.4041 |