Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29087	Apg4b	APG4 (ATG4) autophagy-related homolog B (S. cerevisiae)	1		66615
Gene Ontology	autophagy | cysteine-type peptidase activity | cytoplasm
Human Homolog	APG4B[APG4 autophagy 4 homolog B (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTCGCTCA GTCCTAAAAA (2) 3.2 0.0032 Cb medulloblastoma AGAAACTTGA GAGACAGAAG (4) 4.6 0.0046 P8 GC+1d culture AAATAAATAT (2) GAGACAGAAG (4) TTCTTTCTCT 3.3 0.0033 P8 GC+SHH+1d culture TTCTTTCTCT 2.3 0.0023 Hypothalamus GACAGGAAGG 1.8 0.0018 E12.5 retina AAGTCGCTCA GACAGGAAGG GCAGTGCCTT 5.7 0.0057 P2.5 retina GACAGGAAGG GAGACAGAAG (4) GTCCTAAAAA (2) 5.4 0.0054 P4.5 retina AAATAAATAT (2) GCAGTGCCTT 4 0.004 P6.5 retina AAGTCGCTCA TTCTTTCTCT 6.7 0.0067 P10.5 crx- retina AAGTCGCTCA GTCCTAAAAA (2) 5.6 0.0056 P10.5 crx+ retina GCAGTGCCTT GTCCTAAAAA (2) 3.8 0.0038 Adult retinal AAATAAATAT (2) AAGTCGCTCA AGAAACTTGA GACAGGAAGG 7.6 0.0076 ONL AAATAAATAT (2) AGAAACTTGA GACAGGAAGG GAGACAGAAG (4) GTCCTAAAAA (2) TTCTTTCTCT 19.1 0.0191