Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290876	Sod2	superoxide dismutase 2, mitochondrial	17	17 7.6 cM	20656
Gene Ontology	manganese ion binding | manganese superoxide dismutase activity | manganese superoxide dismutase activity | manganese superoxide dismutase activity | metal ion binding | mitochondrion | oxidoreductase activity | superoxide dismutase activity | superoxide metabolism
Human Homolog	SOD2[superoxide dismutase 2, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTTTATGA GCCTTTATTT 4.9 0.0049 Cb medulloblastoma CAGCTGCACC GAAGACAGAA GATTTTATGA 9.2 0.0092 P8 GC+1d culture CAGCTGCACC CGGCCTACGT GATTTTATGA 11.3 0.0113 P8 GC+SHH+1d culture CAGCTGCACC CGGCCTACGT GATTTTATGA GCCTTTATTT 15.2 0.0152 3T3 fibroblasts CAGCTGCACC 7 0.007 P1 cortex GATTTTATGA GCCTTTATTT 13.6 0.0136 Hypothalamus CTGGGGATTG (3) GAAGACAGAA GATTTTATGA GCCTTTATTT 9 0.009 E12.5 retina GATTTTATGA 13.1 0.0131 E14.5 retina GATTTTATGA GCCTTTATTT 14.6 0.0146 E16.5 retina CTGGGGATTG (3) GATTTTATGA GCCTTTATTT 14.5 0.0145 E18.5 retina CAGCTGCACC GATTTTATGA GCCTTTATTT 16.3 0.0163 P0.5 retina CAGCTGCACC GATTTTATGA GCCTTTATTT 13.8 0.0138 P2.5 retina CAGCTGCACC GAAGACAGAA GATTTTATGA 17.7 0.0177 P4.5 retina CAGCTGCACC GAAGACAGAA GATTTTATGA 17.9 0.0179 P6.5 retina CAGCTGCACC GAAGACAGAA GATTTTATGA GCCTTTATTT 16.7 0.0167 P10.5 crx- retina GATTTTATGA 9.3 0.0093 P10.5 crx+ retina GATTTTATGA GCCTTTATTT 17.3 0.0173 Adult retinal CAGCTGCACC GATTTTATGA 14.9 0.0149 ONL GAAGACAGAA GATTTTATGA GCCTTTATTT 19.1 0.0191