| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTTTAATCC (3) CGCCACCACG (4)
| 55.5 | 0.0555 |
| Cb medulloblastoma | CCTTTAATCC (3) CGCCACCACG (4)
| 48.5 | 0.0485 |
| P8 GC+1d culture | CCTTTAATCC (3) CGCCACCACG (4) GGAGAGAGAA (2)
| 35.4 | 0.0354 |
| P8 GC+SHH+1d culture | CCTTTAATCC (3) CGCCACCACG (4) GAAACAGGAT GGAGAGAGAA (2)
| 37.6 | 0.0376 |
| 3T3 fibroblasts | CCTTTAATCC (3)
| 70.1 | 0.0701 |
| E15 cortex | CCTTTAATCC (3) CGCCACCACG (4)
| 64.3 | 0.0643 |
| P1 cortex | CCTTTAATCC (3) CGCCACCACG (4)
| 159 | 0.159 |
| Hypothalamus | CCTTTAATCC (3) CGCCACCACG (4)
| 29 | 0.029 |
| E12.5 retina | CCTTTAATCC (3) CGCCACCACG (4) GAAACAGGAT GGAGAGAGAA (2)
| 80.8 | 0.0808 |
| E14.5 retina | CCTTTAATCC (3) CGCCACCACG (4)
| 122.1 | 0.1221 |
| E16.5 retina | CCTTTAATCC (3) CGCCACCACG (4)
| 77.9 | 0.0779 |
| E18.5 retina | CCTTTAATCC (3) CGCCACCACG (4) GAGAGAGACA (2)
| 27.2 | 0.0272 |
| P0.5 retina | CCTTTAATCC (3)
| 72.6 | 0.0726 |
| P2.5 retina | CCTTTAATCC (3) CGCCACCACG (4) GGAGAGAGAA (2)
| 81 | 0.081 |
| P4.5 retina | CCTTTAATCC (3) CGCCACCACG (4) GAAACAGGAT GAGAGAGACA (2) GGAGAGAGAA (2)
| 57.5 | 0.0575 |
| P6.5 retina | CCTTTAATCC (3) CGCCACCACG (4) GAGAGAGACA (2)
| 76.7 | 0.0767 |
| P10.5 crx- retina | CCTTTAATCC (3) CGCCACCACG (4)
| 70.6 | 0.0706 |
| P10.5 crx+ retina | CCTTTAATCC (3) CGCCACCACG (4)
| 42.2 | 0.0422 |
| Adult retinal | CCTTTAATCC (3) CGCCACCACG (4)
| 153.7 | 0.1537 |
| ONL | CCTTTAATCC (3) CGCCACCACG (4) GAGAGAGACA (2)
| 101.5 | 0.1015 |