Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291179	Xrn1	5'-3' exoribonuclease 1	9		24127
Mm.291179	BC028454	cDNA sequence BC028454			407833
Mm.291179	A130001C09Rik	RIKEN cDNA A130001C09 gene	9		319802
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAGTCAC (4) 3.3 0.0033 Cb medulloblastoma CAAAAGTCAC (4) GGCTGTGGAA TAAGTTTAAA (4) 11.5 0.0115 P8 GC+1d culture ACAAAAGAAT (5) CAAAAGTCAC (4) GGCCACAGTG GGCTGTGGAA TAACTATTTT (4) TAAGTTTAAA (4) 11.3 0.0113 P8 GC+SHH+1d culture CAAAAGTCAC (4) GGCCACAGTG GGCTGTGGAA TAACTATTTT (4) TTCTGAGATT (3) 15.2 0.0152 3T3 fibroblasts CAAAAGTCAC (4) GGTCTGCCTG GTGGAGCACA (2) 24.5 0.0245 P1 cortex GCAGCTTACA GTGGAGCACA (2) 22.7 0.0227 Hypothalamus CAAAAGTCAC (4) GGTCTGCCTG 3.6 0.0036 E12.5 retina CAAAAGTCAC (4) GCAGCTTACA GGCCACAGTG 11.3 0.0113 E14.5 retina CAAAAGTCAC (4) GCAGCTTACA TAACTATTTT (4) TAAGTTTAAA (4) 10.8 0.0108 E18.5 retina CAAAAGTCAC (4) GAAAGCAGAG (3) GCAGCTTACA GGCCACAGTG GGCTGTGGAA TAAACCAGGC (3) 20 0.02 P0.5 retina ACAAAAGAAT (5) CAAAAGTCAC (4) GCAGCTTACA GGCTGTGGAA GTGGAGCACA (2) 17.8 0.0178 P2.5 retina ACAAAAGAAT (5) CAAAAGTCAC (4) GGCCACAGTG TAAATATACT (3) 14.1 0.0141 P4.5 retina CAAAAGTCAC (4) GCAGCTTACA GGCCACAGTG GGCTGTGGAA 13.9 0.0139 P6.5 retina CAAAAGTCAC (4) GCAGCTTACA GGCCACAGTG GGCTGTGGAA GTGGAGCACA (2) TAAACCAGGC (3) TAAATATACT (3) TAAGTTTAAA (4) 25 0.025 P10.5 crx- retina CAAAAGTCAC (4) GCAGCTTACA TTCTGAGATT (3) 9.4 0.0094 P10.5 crx+ retina CAAAAGTCAC (4) GCAGCTTACA GGCTGTGGAA GTGGAGCACA (2) 13.4 0.0134 Adult retinal CAAAAGTCAC (4) GGTCTGCCTG GTGGAGCACA (2) 9.4 0.0094 ONL GCAGCTTACA GGCCACAGTG GGCTGTGGAA GTGGAGCACA (2) 7.6 0.0076