Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291192	ORF18	open reading frame 18	4	4 C7 (4 51.8 cM)	56374
Gene Ontology	integral to membrane
Human Homolog	C1orf8[chromosome 1 open reading frame 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAGGCAGG (3) CCCCCCGTCA CCCCGCCCCG GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 31 0.031 Cb medulloblastoma AGAGGCAGGG (3) CCCAGAGAAG CCCCCCGTCA GCAGGGGCGG 30.1 0.0301 P8 GC+1d culture AGGAGGCAGG (3) AGGGAGGCGG CCCCCCGTCA GCAGGGGCGG GGAGGGGGGG (2) TCCTGAACCC (2) TTAACCAACT (2) 42.1 0.0421 P8 GC+SHH+1d culture ACTAGTGCTT (4) CACACAGGAA CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 35.2 0.0352 3T3 fibroblasts AGGAGGCAGG (3) CCCCCCGTCA GCAGGGGCGG 105.1 0.1051 E15 cortex CCCCCCGTCA CCCCGCCCCG GCAGGGGCGG TCCTGAACCC (2) 24.6 0.0246 P1 cortex CCCAGAGAAG CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 36.2 0.0362 Hypothalamus AGGAGGCAGG (3) CCCCCCGTCA CCCCGCCCCG GCAGGGGCGG TCCTGAACCC (2) 28.9 0.0289 E12.5 retina ACTAGTGCTT (4) AGGGAGGCGG CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) 30.1 0.0301 E14.5 retina CCCCCCGTCA GCAGGGGCGG GCAGGGGGGG TCCTGAACCC (2) 29.1 0.0291 E16.5 retina AGGAGGCAGG (3) CCCAGAGAAG CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 43.4 0.0434 E18.5 retina CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 45.4 0.0454 P0.5 retina AGAGGCAGGG (3) CCCCCCGTCA GGAGGGGGGG (2) TCCTGAACCC (2) 39.4 0.0394 P2.5 retina CACACAGGAA CCCCCCGTCA GCAGGGGCGG GCAGGGGGGG GGAGGGGGGG (2) TCCTGAACCC (2) TTAACCAACT (2) 52.9 0.0529 P4.5 retina ACTAGTGCTT (4) CCCAGAGAAG CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 41.7 0.0417 P6.5 retina AGGAGGCAGG (3) AGGGAGGCGG CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 71.7 0.0717 P10.5 crx- retina CCCAGAGAAG CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 55.8 0.0558 P10.5 crx+ retina AGGAGGCAGG (3) CCCAGAGAAG CCCCCCGTCA CCCCGCCCCG GCAGGGGCGG TCCTGAACCC (2) 71 0.071 Adult retinal AGAGGCAGGG (3) AGGAGGCAGG (3) CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) TTAACCAACT (2) 44.6 0.0446 ONL CACACAGGAA CCCCCCGTCA GCAGGGGCGG TCCTGAACCC (2) 28.7 0.0287